CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022475
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Thymocyte nuclear protein 1 
Protein Synonyms/Alias
 Thymocyte protein Thy28 
Gene Name
 THYN1 
Gene Synonyms/Alias
 THY28; HSPC144; MDS012; My0054 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
16AGTSGSDKGLSGKRTacetylation[1]
42VEDSNPQKTSATKNCubiquitination[1]
51SATKNCLKNLSSHWLacetylation[1]
60LSSHWLMKSEPESRLubiquitination[1, 2]
69EPESRLEKGVDVKFSubiquitination[1, 2]
81KFSIEDLKAQPKQTTacetylation[3]
81KFSIEDLKAQPKQTTubiquitination[1, 2]
85EDLKAQPKQTTCWDGubiquitination[1, 2, 4]
119FFYHSNCKEPGIAGLubiquitination[1, 2]
131AGLMKIVKEAYPDHTubiquitination[2]
142PDHTQFEKNNPHYDPubiquitination[1]
152PHYDPSSKEDNPKWSubiquitination[2]
Reference
 [1] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [4] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
  
Sequence Annotation
 MOTIF 5 10 Nuclear localization signal (By  
Keyword
 3D-structure; Alternative splicing; Complete proteome; Nucleus; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 225 AA 
Protein Sequence
MSRPRKRLAG TSGSDKGLSG KRTKTENSGE ALAKVEDSNP QKTSATKNCL KNLSSHWLMK 60
SEPESRLEKG VDVKFSIEDL KAQPKQTTCW DGVRNYQARN FLRAMKLGEE AFFYHSNCKE 120
PGIAGLMKIV KEAYPDHTQF EKNNPHYDPS SKEDNPKWSM VDVQFVRMMK RFIPLAELKS 180
YHQAHKATGG PLKNMVLFTR QRLSIQPLTQ EEFDFVLSLE EKEPS 225 
Gene Ontology
 GO:0005634; C:nucleus; ISS:HGNC. 
Interpro
 IPR002740; EVE_domain.
 IPR015947; PUA-like_domain. 
Pfam
 PF01878; EVE 
SMART
  
PROSITE
  
PRINTS