CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039151
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Rbm27 
Protein Synonyms/Alias
  
Gene Name
 Rbm27 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
500LEGPLTKKPWLGKQGacetylation[1]
526KNQYTNTKLEVKKIPacetylation[1]
659GIQKMMGKPQTSGAYacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; RNA-binding; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 985 AA 
Protein Sequence
CDADPSALAN YVVALVKKDK PEKELKAFCA DQLDVFLQKE TSGFVDKLFE SLYTKNYLPP 60
LEPVKPEPKP LVQEKEEIKE EVFQEPAEEE RDVRKKKYPS PQKSRSESSE RRTREKKRED 120
GKWRDYERYY ERNELYREKY DWRRGRSKSR SKSRGLSRSR SRSRGRSKDR DPNRNVEHRE 180
RSKFKSERND LESSYVPVSA PPPNSSEQYS SGAQSIPSTV TVIAPAHHSE NTTESWSNYY 240
NNHSSSNSFG RNPPPKRRCR DYDERGFCVL GDLCQFDHGN DPLVVDEVAL PSMIPFPPPP 300
PGLPPPPPPG MLMPPMPGPG PGPGPGPGPG PGPGPGPGHS MRLPVPQGHG QPPPSVVLPI 360
PRPPISQSSL INSRDQPGTS AVPNLAPVGA RLPPPLPQNL LYTVSENTYE PDGYNPEAPS 420
ITSSGRSQYR QFFSRAQTQR PNLIGLTSGD MDANPRAANI VIQTEPPVPV SINSNITRVV 480
LEPESRKRAI SGLEGPLTKK PWLGKQGNNN QSKPGFLRKN QYTNTKLEVK KIPQELNNIT 540
KLNEHFSKFG TIVNIQVAFK GDPEAALIQY LTNEEARKAI SSTEAVLNNR FIRVLWHREN 600
NEQPALQSSA QILLQQQHTL SHLSQQHHNL PQHLHPQQVM VTQSSPSSVH GGIQKMMGKP 660
QTSGAYVLNK VPVKHRLGHA TTNQSDTSHL LNQTGGSSGD DCPVFSTPGH PKTIYSSSNL 720
KAPSKLCSGS KSHDVQEVLK KKQEAMKLQQ DMRKKRQEML EKQIECQKML ISKLEKNKNM 780
KPEERANIMK TLKELGEKIS QLKDELKTSS AVSTPSKVKT KTEAQKELLD TELDLHKRLS 840
SGEDTTELRK KLSQLQVEAA RLGILPVGRG KTMSSQGRGR GRGRGRGRGS LNHMVVDHRP 900
KALPAGGFIE EEKEELLQHF SATNQSSKFK DRRLQISWHK PKVPSISTET EEEEVKEEET 960
ETSDLFLHDD DDEDEDEYES RSWRR 985 
Gene Ontology
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom.
 IPR000571; Znf_CCCH. 
Pfam
 PF00642; zf-CCCH 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM
 PS50103; ZF_C3H1 
PRINTS