CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031220
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 cDNA FLJ54848, highly similar to tRNA-splicing endonuclease subunit Sen34 (EC 3.1.27.9) 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
87SLALTSFKRQQEESFubiquitination[1]
115RRQELLEKITEGQAAubiquitination[1]
123ITEGQAAKKQKLEQAubiquitination[1]
126GQAAKKQKLEQASGAubiquitination[1]
207LDWRVQSKDWPHAGRubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983] 
Functional Description
  
Sequence Annotation
  
Keyword
 Endonuclease; Hydrolase; Nuclease. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 312 AA 
Protein Sequence
MLVVEVANGR SLVWGAEAVQ ALRERLGVGG RTVGALPRGP RQNSRLGLPL LLMPEEARLL 60
AEIGAVTLVS APRPDSRHHS LALTSFKRQQ EESFQEQSAL AAEARETRRQ ELLEKITEGQ 120
AAKKQKLEQA SGASSSQEAG SSQAAKEDET SDGQASGEQE EAGPSSSQAG PSNGVAPLPR 180
SALLVQMATA RPRPVKARPL DWRVQSKDWP HAGRPAHELR YSIYRDLWER GFFLSAAGKF 240
GGDFLVYPGD PLRFHAHYIA QCWAPEDTIP LQDLVAAGRL GTSVRKTLLL CSPQPDGFKS 300
QEVSINLVYK CS 312 
Gene Ontology
 GO:0000214; C:tRNA-intron endonuclease complex; IEA:InterPro.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000213; F:tRNA-intron endonuclease activity; IEA:InterPro.
 GO:0090305; P:nucleic acid phosphodiester bond hydrolysis; IEA:GOC.
 GO:0000379; P:tRNA-type intron splice site recognition and cleavage; IEA:InterPro. 
Interpro
 IPR011856; tRNA_endonuc-like_dom.
 IPR006677; tRNA_intron_Endonuc_cat-like.
 IPR006676; tRNA_splic.
 IPR016690; tRNA_splic_SEN34. 
Pfam
 PF01974; tRNA_int_endo 
SMART
  
PROSITE
  
PRINTS