CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007163
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Flavohemoprotein 
Protein Synonyms/Alias
 Flavohemoglobin; Hemoglobin-like protein; Nitric oxide dioxygenase; NO oxygenase; NOD 
Gene Name
 YHB1 
Gene Synonyms/Alias
 YHB; YGR234W; G8572 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
66TTVLAAAKNIDDLSVubiquitination[1]
217SLCSASTKNGLRFAVubiquitination[1]
225NGLRFAVKMEAARENacetylation[2]
350LINAAFLKEKSPAHAacetylation[2]
350LINAAFLKEKSPAHAubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the fungus from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress. 
Sequence Annotation
 DOMAIN 147 264 FAD-binding FR-type.
 NP_BIND 207 210 FAD (By similarity).
 NP_BIND 281 286 NADP (By similarity).
 NP_BIND 389 392 FAD (By similarity).
 REGION 1 138 Globin.
 REGION 146 399 Reductase.
 REGION 272 399 NAD or NADP-binding.
 ACT_SITE 95 95 Charge relay system (By similarity).
 ACT_SITE 137 137 Charge relay system (By similarity).
 METAL 85 85 Iron (heme proximal ligand) (By
 BINDING 189 189 FAD (By similarity).
 MOD_RES 22 22 Phosphothreonine.  
Keyword
 Complete proteome; Cytoplasm; Detoxification; Direct protein sequencing; FAD; Flavoprotein; Heme; Iron; Metal-binding; NAD; NADP; Oxidoreductase; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 399 AA 
Protein Sequence
MLAEKTRSII KATVPVLEQQ GTVITRTFYK NMLTEHTELL NIFNRTNQKV GAQPNALATT 60
VLAAAKNIDD LSVLMDHVKQ IGHKHRALQI KPEHYPIVGE YLLKAIKEVL GDAATPEIIN 120
AWGEAYQAIA DIFITVEKKM YEEALWPGWK PFDITAKEYV ASDIVEFTVK PKFGSGIELE 180
SLPITPGQYI TVNTHPIRQE NQYDALRHYS LCSASTKNGL RFAVKMEAAR ENFPAGLVSE 240
YLHKDAKVGD EIKLSAPAGD FAINKELIHQ NEVPLVLLSS GVGVTPLLAM LEEQVKCNPN 300
RPIYWIQSSY DEKTQAFKKH VDELLAECAN VDKIIVHTDT EPLINAAFLK EKSPAHADVY 360
TCGSLAFMQA MIGHLKELEH RDDMIHYEPF GPKMSTVQV 399 
Gene Ontology
 GO:0005829; C:cytosol; IDA:SGD.
 GO:0005759; C:mitochondrial matrix; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0020037; F:heme binding; IEA:InterPro.
 GO:0005506; F:iron ion binding; IEA:InterPro.
 GO:0008941; F:nitric oxide dioxygenase activity; IEA:EC.
 GO:0016966; F:nitric oxide reductase activity; IMP:SGD.
 GO:0019825; F:oxygen binding; IEA:InterPro.
 GO:0015671; P:oxygen transport; IEA:InterPro.
 GO:0009636; P:response to toxic substance; IEA:UniProtKB-KW. 
Interpro
 IPR017927; Fd_Rdtase_FAD-bd.
 IPR000971; Globin.
 IPR009050; Globin-like.
 IPR012292; Globin_dom.
 IPR008333; OxRdtase_FAD-bd_dom.
 IPR001433; OxRdtase_FAD/NAD-bd.
 IPR017938; Riboflavin_synthase-like_b-brl. 
Pfam
 PF00970; FAD_binding_6
 PF00042; Globin
 PF00175; NAD_binding_1 
SMART
  
PROSITE
 PS51384; FAD_FR
 PS01033; GLOBIN 
PRINTS