CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005010
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Sensor protein KdpD 
Protein Synonyms/Alias
  
Gene Name
 kdpD 
Gene Synonyms/Alias
 b0695; JW0683 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
326LSDPAEEKAVVRYARacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Member of the two-component regulatory system KdpD/KdpE involved in the regulation of the kdp operon. KdpD may function as a membrane-associated protein kinase that phosphorylates KdpE in response to environmental signals. 
Sequence Annotation
 DOMAIN 670 883 Histidine kinase.
 MOD_RES 673 673 Phosphohistidine; by autocatalysis (By  
Keyword
 3D-structure; ATP-binding; Cell inner membrane; Cell membrane; Complete proteome; Kinase; Membrane; Nucleotide-binding; Phosphoprotein; Reference proteome; Transferase; Transmembrane; Transmembrane helix; Two-component regulatory system. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 894 AA 
Protein Sequence
MNNEPLRPDP DRLLEQTAAP HRGKLKVFFG ACAGVGKTWA MLAEAQRLRA QGLDIVVGVV 60
ETHGRKDTAA MLEGLAVLPL KRQAYRGRHI SEFDLDAALA RRPALILMDE LAHSNAPGSR 120
HPKRWQDIEE LLEAGIDVFT TVNVQHLESL NDVVSGVTGI QVRETVPDPF FDAADDVVLV 180
DLPPDDLRQR LKEGKVYIAG QAERAIEHFF RKGNLIALRE LALRRTADRV DEQMRAWRGH 240
PGEEKVWHTR DAILLCIGHN TGSEKLVRAA ARLASRLGSV WHAVYVETPA LHRLPEKKRR 300
AILSALRLAQ ELGAETATLS DPAEEKAVVR YAREHNLGKI ILGRPASRRW WRRETFADRL 360
ARIAPDLDQV LVALDEPPAR TINNAPDNRS FKDKWRVQIQ GCVVAAALCA VITLIAMQWL 420
MAFDAANLVM LYLLGVVVVA LFYGRWPSVV ATVINVVSFD LFFIAPRGTL AVSDVQYLLT 480
FAVMLTVGLV IGNLTAGVRY QARVARYREQ RTRHLYEMSK ALAVGRSPQD IAATSEQFIA 540
STFHARSQVL LPDDNGKLQP LTHPQGMTPW DDAIAQWSFD KGLPAGAGTD TLPGVPYQIL 600
PLKSGEKTYG LVVVEPGNLR QLMIPEQQRL LETFTLLVAN ALERLTLTAS EEQARMASER 660
EQIRNALLAA LSHDLRTPLT VLFGQAEILT LDLASEGSPH ARQASEIRQH VLNTTRLVNN 720
LLDMARIQSG GFNLKKEWLT LEEVVGSALQ MLEPGLSSPI NLSLPEPLTL IHVDGPLFER 780
VLINLLENAV KYAGAQAEIG IDAHVEGENL QLDVWDNGPG LPPGQEQTIF DKFARGNKES 840
AVPGVGLGLA ICRAIVDVHG GTITAFNRPE GGACFRVTLP QQTAPELEEF HEDM 894 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0031235; C:intrinsic to internal side of plasma membrane; IDA:EcoCyc.
 GO:0004072; F:aspartate kinase activity; IDA:EcoCyc.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0000155; F:phosphorelay sensor kinase activity; IDA:EcoCyc.
 GO:0009593; P:detection of chemical stimulus; IDA:EcoCyc.
 GO:0007234; P:osmosensory signaling via phosphorelay pathway; IDA:EcoCyc.
 GO:0046777; P:protein autophosphorylation; IDA:EcoCyc. 
Interpro
 IPR025201; DUF4118.
 IPR003018; GAF.
 IPR003594; HATPase_ATP-bd.
 IPR014729; Rossmann-like_a/b/a_fold.
 IPR004358; Sig_transdc_His_kin-like_C.
 IPR003661; Sig_transdc_His_kin_sub1_dim/P.
 IPR005467; Sig_transdc_His_kinase_core.
 IPR009082; Sig_transdc_His_kinase_dimeric.
 IPR003852; Sig_transdc_His_kinase_KdpD_N.
 IPR006016; UspA. 
Pfam
 PF13493; DUF4118
 PF13492; GAF_3
 PF02518; HATPase_c
 PF00512; HisKA
 PF02702; KdpD
 PF00582; Usp 
SMART
 SM00387; HATPase_c
 SM00388; HisKA 
PROSITE
 PS50109; HIS_KIN 
PRINTS
 PR00344; BCTRLSENSOR.