CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022933
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cysteine and histidine-rich domain-containing protein 1 
Protein Synonyms/Alias
 CHORD domain-containing protein 1; CHORD-containing protein 1; CHP-1; Protein morgana 
Gene Name
 CHORDC1 
Gene Synonyms/Alias
 CHP1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
89KKELCELKPKFQEHIubiquitination[1]
91ELCELKPKFQEHIIQubiquitination[1, 2, 3]
198YWSCCRRKTSDFNTFacetylation[4]
198YWSCCRRKTSDFNTFubiquitination[1]
220KGKHMWTKKDAGKKVacetylation[4]
289LWGVIDVKRSYVTMTubiquitination[2, 3, 5, 6]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [4] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786]
 [5] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [6] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 Regulates centrosome duplication, probably by inhibiting the kinase activity of ROCK2. Proposed to act as co-chaperone for HSP90. May play a role in the regulation of NOD1 via a HSP90 chaperone complex. In vitro, has intrinsic chaperone activity. This function may be achieved by inhibiting association of ROCK2 with NPM1. Involved in stress response. Prevents tumorigenesis. 
Sequence Annotation
 DOMAIN 5 64 CHORD 1.
 DOMAIN 157 216 CHORD 2.
 DOMAIN 227 316 CS.
 REGION 2 77 Interaction with PPP5C (By similarity).
 REGION 65 316 Interaction with HSP90AA1 and HSP90AB1
 METAL 5 5 Zinc 1.
 METAL 10 10 Zinc 1.
 METAL 24 24 Zinc 1.
 METAL 27 27 Zinc 2.
 METAL 42 42 Zinc 2.
 METAL 43 43 Zinc 2.
 METAL 59 59 Zinc 2.
 METAL 64 64 Zinc 1.
 METAL 157 157 Zinc 3 (By similarity).
 METAL 162 162 Zinc 3 (By similarity).
 METAL 176 176 Zinc 3 (By similarity).
 METAL 179 179 Zinc 4 (By similarity).
 METAL 194 194 Zinc 4 (By similarity).
 METAL 195 195 Zinc 4 (By similarity).
 METAL 211 211 Zinc 4 (By similarity).
 METAL 216 216 Zinc 3 (By similarity).
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 47 47 Phosphothreonine.
 MOD_RES 51 51 Phosphoserine.
 MOD_RES 204 204 Phosphothreonine (By similarity).  
Keyword
 3D-structure; Acetylation; Alternative splicing; Chaperone; Complete proteome; Direct protein sequencing; Metal-binding; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Stress response; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 332 AA 
Protein Sequence
MALLCYNRGC GQRFDPETNS DDACTYHPGV PVFHDALKGW SCCKRRTTDF SDFLSIVGCT 60
KGRHNSEKPP EPVKPEVKTT EKKELCELKP KFQEHIIQAP KPVEAIKRPS PDEPMTNLEL 120
KISASLKQAL DKLKLSSGNE ENKKEEDNDE IKIGTSCKNG GCSKTYQGLE SLEEVCVYHS 180
GVPIFHEGMK YWSCCRRKTS DFNTFLAQEG CTKGKHMWTK KDAGKKVVPC RHDWHQTGGE 240
VTISVYAKNS LPELSRVEAN STLLNVHIVF EGEKEFDQNV KLWGVIDVKR SYVTMTATKI 300
EITMRKAEPM QWASLELPAA KKQEKQKDAT TD 332 
Gene Ontology
 GO:0008270; F:zinc ion binding; IEA:Compara.
 GO:0061077; P:chaperone-mediated protein folding; ISS:UniProtKB.
 GO:2000299; P:negative regulation of Rho-dependent protein serine/threonine kinase activity; IEA:Compara.
 GO:0010824; P:regulation of centrosome duplication; IEA:Compara.
 GO:0080134; P:regulation of response to stress; ISS:UniProtKB.
 GO:0006950; P:response to stress; IEA:UniProtKB-KW. 
Interpro
 IPR007051; CHORD.
 IPR007052; CS-like_domain.
 IPR017447; CS_domain.
 IPR008978; HSP20-like_chaperone. 
Pfam
 PF04968; CHORD
 PF04969; CS 
SMART
  
PROSITE
 PS51401; CHORD
 PS51203; CS 
PRINTS