CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019950
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Glycerophosphodiester phosphodiesterase domain-containing protein 3 
Protein Synonyms/Alias
  
Gene Name
 Gdpd3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
161RNEELIHKVANLTRRubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
 DOMAIN 44 303 GDPD.
 METAL 71 71 Divalent metal cation (Potential).
 METAL 73 73 Divalent metal cation (Potential).
 METAL 86 86 Divalent metal cation (Potential).  
Keyword
 Complete proteome; Hydrolase; Membrane; Metal-binding; Reference proteome; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 330 AA 
Protein Sequence
MIPLLYFVLP TLGSYVMLSI FFLRRPHLLH TPRAPVFPIR LAAHRGGSGE RLENTMEAVE 60
NSMAQRADLL EFDCQLTRDG VVVVSHDKNL SRQSGLNKDV NTLDFEELPL YKEELEIYFS 120
PGHFAHGSDR HMISLEDVFQ KFPRTPMCLE VKERNEELIH KVANLTRRFD RNEITIWAAE 180
KSSVMKRCRA ANPEMPMAFT IWRSFWILLL YYLGLLPFVS IPEKFFFCFL PTIINRTYFP 240
FRCGWMNQLS ATITKWIIMR KSLIRHLQDR GVQVLFWCLN EESDFEVAFS LGANGVMTDY 300
PTALRHYLDK QEEETQPPQP EALSCLSLKK 330 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0006071; P:glycerol metabolic process; IEA:InterPro.
 GO:0006629; P:lipid metabolic process; IEA:InterPro. 
Interpro
 IPR004129; GlyceroP-diester-Pdiesterase.
 IPR017946; PLC-like_Pdiesterase_TIM-brl. 
Pfam
 PF03009; GDPD 
SMART
  
PROSITE
  
PRINTS