CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022689
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vacuolar protein sorting-associated protein 29 
Protein Synonyms/Alias
 Vesicle protein sorting 29 
Gene Name
 Vps29 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
50KESYDYLKTLAGDVHubiquitination[1]
73NLNYPEQKVVTVGQFubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Essential component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network. Also required to regulate transcytosis of the polymeric immunoglobulin receptor (pIgR-pIgA). Has low protein phosphatase activity towards a serine-phosphorylated peptide derived from IGF2R (in vitro) (By similarity). Has no activity towards p-nitrophenylphosphate, p- nitrophenylphosphorylcholine or phosphatidylinositlphosphates (in vitro). 
Sequence Annotation
 METAL 8 8 Zinc 1.
 METAL 10 10 Zinc 1.
 METAL 39 39 Zinc 1.
 METAL 39 39 Zinc 2.
 METAL 62 62 Zinc 2.
 METAL 86 86 Zinc 2.
 METAL 115 115 Zinc 2.
 METAL 117 117 Zinc 1.
 MOD_RES 50 50 N6-acetyllysine (By similarity).  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; Endosome; Hydrolase; Membrane; Metal-binding; Protein transport; Reference proteome; Transport; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 182 AA 
Protein Sequence
MLVLVLGDLH IPHRCNSLPA KFKKLLVPGK IQHILCTGNL CTKESYDYLK TLAGDVHIVR 60
GDFDENLNYP EQKVVTVGQF KIGLIHGHQV IPWGDMASLA LLQRQFDVDI LISGHTHKFE 120
AFEHENKFYI NPGSATGAYN ALETNIIPSF VLMDIQASTV VTYVYQLIGD DVKVERIEYK 180
KS 182 
Gene Ontology
 GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0004647; F:phosphoserine phosphatase activity; IEA:EC.
 GO:0006896; P:Golgi to vacuole transport; ISS:MGI.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW. 
Interpro
 IPR024654; Calcineurin-like_PEstase_dom.
 IPR000979; Phosphodiesterase_MJ0936. 
Pfam
 PF12850; Metallophos_2 
SMART
  
PROSITE
  
PRINTS