CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012901
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial 
Protein Synonyms/Alias
 PDHE1-B; Protein MACCI-BOU 
Gene Name
 PDH2 
Gene Synonyms/Alias
 MAB1; At5g50850; K16E14.1 
Created Date
 July 27, 2013 
Organism
 Arabidopsis thaliana (Mouse-ear cress) 
NCBI Taxa ID
 3702 
Lysine Modification
Position
Peptide
Type
References
34RSYAAGAKEMTVRDAubiquitination[1]
247VTIVTFSKMVGFALKubiquitination[1]
254KMVGFALKAAEKLAEubiquitination[1]
Reference
 [1] Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants.
 Maor R, Jones A, Nühse TS, Studholme DJ, Peck SC, Shirasu K.
 Mol Cell Proteomics. 2007 Apr;6(4):601-10. [PMID: 17272265
Functional Description
 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). 
Sequence Annotation
 BINDING 92 92 Thiamine pyrophosphate (By similarity).
 CROSSLNK 34 34 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 247 247 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 254 254 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Complete proteome; Glycolysis; Isopeptide bond; Mitochondrion; Oxidoreductase; Pyruvate; Reference proteome; Thiamine pyrophosphate; Transit peptide; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 363 AA 
Protein Sequence
MLGILRQRAI DGASTLRRTR FALVSARSYA AGAKEMTVRD ALNSAIDEEM SADPKVFVMG 60
EEVGQYQGAY KITKGLLEKY GPERVYDTPI TEAGFTGIGV GAAYAGLKPV VEFMTFNFSM 120
QAIDHIINSA AKSNYMSAGQ INVPIVFRGP NGAAAGVGAQ HSQCYAAWYA SVPGLKVLAP 180
YSAEDARGLL KAAIRDPDPV VFLENELLYG ESFPISEEAL DSSFCLPIGK AKIEREGKDV 240
TIVTFSKMVG FALKAAEKLA EEGISAEVIN LRSIRPLDRA TINASVRKTS RLVTVEEGFP 300
QHGVCAEICA SVVEESFSYL DAPVERIAGA DVPMPYAANL ERLALPQIED IVRASKRACY 360
RSK 363 
Gene Ontology
 GO:0048046; C:apoplast; IDA:TAIR.
 GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:TAIR.
 GO:0005730; C:nucleolus; IDA:TAIR.
 GO:0005774; C:vacuolar membrane; IDA:TAIR.
 GO:0004739; F:pyruvate dehydrogenase (acetyl-transferring) activity; IEA:EC.
 GO:0006086; P:acetyl-CoA biosynthetic process from pyruvate; IEA:InterPro.
 GO:0042742; P:defense response to bacterium; IEP:TAIR.
 GO:0006096; P:glycolysis; IEA:UniProtKB-KW. 
Interpro
 IPR027110; PDHB.
 IPR009014; Transketo_C/Pyr-ferredox_oxred.
 IPR015941; Transketolase-like_C.
 IPR005475; Transketolase-like_Pyr-bd.
 IPR005476; Transketolase_C. 
Pfam
 PF02779; Transket_pyr
 PF02780; Transketolase_C 
SMART
 SM00861; Transket_pyr 
PROSITE
  
PRINTS