CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001655
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 TBC1 domain family member 8 
Protein Synonyms/Alias
 AD 3; Vascular Rab-GAP/TBC-containing protein 
Gene Name
 TBC1D8 
Gene Synonyms/Alias
 VRP 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
32QEPSQITKRDLEARAubiquitination[1]
527LIRDSYEKFGDQSVEubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 May act as a GTPase-activating protein for Rab family protein(s). 
Sequence Annotation
 DOMAIN 145 212 GRAM 1.
 DOMAIN 285 353 GRAM 2.
 DOMAIN 505 692 Rab-GAP TBC.  
Keyword
 Alternative splicing; Complete proteome; GTPase activation; Polymorphism; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1140 AA 
Protein Sequence
MEQLADVTLR RLLDNEVFDL DPDLQEPSQI TKRDLEARAQ NEFFRAFFRL PRKEKLHAVV 60
DCSLWTPFSR CHTTGRMFAS DSYICFASRE DGCCKIILPL REVVSIEKME DTSLLPHPII 120
VSIRSKVAFQ FIELRDRDSL VEALLARLKQ VHANHPVHYD TSADDDMASL VFHSTSMCSD 180
HRFGDLEMMS SQNSEESEKE KSPLMHPDAL VTAFQQSGSQ SPDSRMSREQ IKISLWNDHF 240
VEYGRTVCMF RTEKIRKLVA MGIPESLRGR LWLLFSDAVT DLASHPGYYG NLVEESLGKC 300
CLVTEEIERD LHRSLPEHPA FQNETGIAAL RRVLTAYAHR NPKIGYCQSM NILTSVLLLY 360
TKEEEAFWLL VAVCERMLPD YFNHRVIGAQ VDQSVFEELI KGHLPELAEH MNDLSALASV 420
SLSWFLTLFL SIMPLESAVN VVDCFFYDGI KAIFQLGLAV LEANAEDLCS SKDDGQALMI 480
LSRFLDHIKN EDSPGPPVGS HHAFFSDDQE PYPVTDISDL IRDSYEKFGD QSVEQIEHLR 540
YKHRIRVLQG HEDTTKQNVL RVVIPEVSIL PEDLEELYDL FKREHMMSCY WEQPRPMASR 600
HDPSRPYAEQ YRIDARQFAH LFQLVSPWTC GAHTEILAER TFRLLDDNMD QLIEFKAFVS 660
CLDIMYNGEM NEKIKLLYRL HIPPALTEND RDSQSPLRNP LLSTSRPLVF GKPNGDAVDY 720
QKQLKQMIKD LAKEKDKTEK ELPKMSQREF IQFCKTLYSM FHEDPEENDL YQAIATVTTL 780
LLQIGEVGQR GSSSGSCSQE CGEELRASAP SPEDSVFADT GKTPQDSQAF PEAAERDWTV 840
SLEHILASLL TEQSLVNFFE KPLDMKSKLE NAKINQYNLK TFEMSHQSQS ELKLSNL 897 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0016020; C:membrane; TAS:ProtInc.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
 GO:0008015; P:blood circulation; TAS:ProtInc.
 GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.
 GO:0032851; P:positive regulation of Rab GTPase activity; IEA:GOC. 
Interpro
 IPR011992; EF-hand-like_dom.
 IPR004182; GRAM.
 IPR000195; Rab-GTPase-TBC_dom. 
Pfam
 PF02893; GRAM
 PF00566; RabGAP-TBC 
SMART
 SM00568; GRAM
 SM00164; TBC 
PROSITE
 PS50086; TBC_RABGAP 
PRINTS