CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022935
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Septin-9 
Protein Synonyms/Alias
 MLL septin-like fusion protein MSF-A; MLL septin-like fusion protein; Ovarian/Breast septin; Ov/Br septin; Septin D1 
Gene Name
 SEPT9 
Gene Synonyms/Alias
 KIAA0991; MSF 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
62TVASSTQKFQDLGVKubiquitination[1]
186PATDAAPKRVEIQMPubiquitination[2]
262TPRDAGLKQAPASRNubiquitination[1]
271APASRNEKAPVDFGYubiquitination[1]
320TLINTLFKSKISRKSubiquitination[1]
322INTLFKSKISRKSVQubiquitination[1]
326FKSKISRKSVQPTSEubiquitination[1]
338TSEERIPKTIEIKSIubiquitination[1]
343IPKTIEIKSITHDIEubiquitination[1]
352ITHDIEEKGVRMKLTacetylation[3]
352ITHDIEEKGVRMKLTubiquitination[1]
357EEKGVRMKLTVIDTPubiquitination[1]
389FINDQYEKYLQEEVNubiquitination[1]
431PLDIEFMKRLSKVVNubiquitination[1]
435EFMKRLSKVVNIVPVubiquitination[1, 2, 4]
445NIVPVIAKADTLTLEubiquitination[1]
476GIDVYPQKEFDEDSEubiquitination[1, 2, 5, 6, 7, 8, 9]
490EDRLVNEKFREMIPFubiquitination[1, 2, 4, 5, 6, 8, 9, 10]
511HEYQVNGKRILGRKTubiquitination[1, 7, 9]
517GKRILGRKTKWGTIEubiquitination[1]
519RILGRKTKWGTIEVEubiquitination[1, 9]
549RTHMQNIKDITSSIHubiquitination[1, 9]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [4] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [5] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [6] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [7] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [8] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [9] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [10] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
 Filament-forming cytoskeletal GTPase (By similarity). May play a role in cytokinesis (Potential). May play a role in the internalization of 2 intracellular microbial pathogens, Listeria monocytogenes and Shigella flexneri. 
Sequence Annotation
 NP_BIND 305 312 GTP (By similarity).
 NP_BIND 445 453 GTP (By similarity).
 BINDING 339 339 GTP (By similarity).
 BINDING 365 365 GTP; via amide nitrogen (By similarity).
 BINDING 501 501 GTP; via amide nitrogen and carbonyl
 BINDING 516 516 GTP (By similarity).
 MOD_RES 30 30 Phosphoserine.
 MOD_RES 38 38 Phosphothreonine.
 MOD_RES 42 42 Phosphothreonine.
 MOD_RES 82 82 Phosphoserine.
 MOD_RES 85 85 Phosphoserine.
 MOD_RES 96 96 Phosphoserine.
 MOD_RES 142 142 Phosphothreonine.
 MOD_RES 160 160 Phosphoserine (By similarity).
 MOD_RES 278 278 Phosphotyrosine.
 MOD_RES 327 327 Phosphoserine.  
Keyword
 Alternative splicing; Cell cycle; Cell division; Chromosomal rearrangement; Complete proteome; Cytoplasm; Cytoskeleton; Disease mutation; GTP-binding; Nucleotide-binding; Phosphoprotein; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 586 AA 
Protein Sequence
MKKSYSGGTR TSSGRLRRLG DSSGPALKRS FEVEEVETPN STPPRRVQTP LLRATVASST 60
QKFQDLGVKN SEPSARHVDS LSQRSPKASL RRVELSGPKA AEPVSRRTEL SIDISSKQVE 120
NAGAIGPSRF GLKRAEVLGH KTPEPAPRRT EITIVKPQES AHRRMEPPAS KVPEVPTAPA 180
TDAAPKRVEI QMPKPAEAPT APSPAQTLEN SEPAPVSQLQ SRLEPKPQPP VAEATPRSQE 240
ATEAAPSCVG DMADTPRDAG LKQAPASRNE KAPVDFGYVG IDSILEQMRR KAMKQGFEFN 300
IMVVGQSGLG KSTLINTLFK SKISRKSVQP TSEERIPKTI EIKSITHDIE EKGVRMKLTV 360
IDTPGFGDHI NNENCWQPIM KFINDQYEKY LQEEVNINRK KRIPDTRVHC CLYFIPATGH 420
SLRPLDIEFM KRLSKVVNIV PVIAKADTLT LEERVHFKQR ITADLLSNGI DVYPQKEFDE 480
DSEDRLVNEK FREMIPFAVV GSDHEYQVNG KRILGRKTKW GTIEVENTTH CEFAYLRDLL 540
IRTHMQNIKD ITSSIHFEAY RVKRLNEGSS AMANGMEEKE PEAPEM 586 
Gene Ontology
 GO:0005874; C:microtubule; IDA:UniProtKB.
 GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
 GO:0001725; C:stress fiber; IDA:UniProtKB.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0003924; F:GTPase activity; TAS:ProtInc.
 GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
 GO:0051301; P:cell division; IEA:UniProtKB-KW.
 GO:0051291; P:protein heterooligomerization; IDA:UniProtKB. 
Interpro
 IPR000038; Cell_div_GTP-bd.
 IPR027417; P-loop_NTPase. 
Pfam
 PF00735; Septin 
SMART
  
PROSITE
  
PRINTS