CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-010602
UniProt Accession
MDHC1_ARATH
;
P93819
Genbank Protein ID
AC000104
;
CP002684
;
AY050374
;
AY065134
;
AY081563
;
AY133655
;
AY088023
Genbank Nucleotide ID
AAB70434.1
;
AEE27694.1
;
AAK91392.1
;
AAL38310.1
;
AAM10125.1
;
AAM91485.1
;
AAM65569.1
Protein Name
Malate dehydrogenase, cytoplasmic 1
Protein Synonyms/Alias
Gene Name
At1g04410; F19P19.13
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Arabidopsis thaliana (Mouse-ear cress)
NCBI Taxa ID
3702
Lysine Modification
Position
Peptide
Type
References
3
*****MA
K
EPVRVLV
acetylation
[1]
Reference
[1] Proteins of diverse function and subcellular location are lysine acetylated in Arabidopsis.
Finkemeier I, Laxa M, Miguet L, Howden AJ, Sweetlove LJ.
Plant Physiol. 2011 Apr;155(4):1779-90. [
PMID: 21311031
]
Functional Description
Sequence Annotation
NP_BIND 12 18 NAD (By similarity).
NP_BIND 130 132 NAD (By similarity).
ACT_SITE 188 188 Proton acceptor (By similarity).
BINDING 93 93 Substrate (By similarity).
BINDING 99 99 Substrate (By similarity).
BINDING 106 106 NAD (By similarity).
BINDING 113 113 NAD (By similarity).
BINDING 132 132 Substrate (By similarity).
BINDING 163 163 Substrate (By similarity).
MOD_RES 204 204 Phosphoserine.
MOD_RES 205 205 Phosphoserine.
CROSSLNK 119 119 Glycyl lysine isopeptide (Lys-Gly)
Keyword
Complete proteome; Cytoplasm; Isopeptide bond; NAD; Oxidoreductase; Phosphoprotein; Reference proteome; Tricarboxylic acid cycle; Ubl conjugation.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
332 AA
Protein Sequence
MAKEPVRVLV TGAAGQIGYA LVPMIARGIM LGADQPVILH MLDIPPAAEA LNGVKMELID 60
AAFPLLKGVV ATTDAVEGCT GVNVAVMVGG FPRKEGMERK DVMSKNVSIY KSQAAALEKH 120
AAPNCKVLVV ANPANTNALI LKEFAPSIPE KNISCLTRLD HNRALGQISE RLSVPVSDVK 180
NVIIWGNHSS SQYPDVNHAK VQTSSGEKPV RELVKDDAWL DGEFISTVQQ RGAAIIKARK 240
LSSALSAASS ACDHIRDWVL GTPEGTFVSM GVYSDGSYSV PSGLIYSFPV TCRNGDWSIV 300
QGLPIDEVSR KKMDLTAEEL KEEKDLAYSC LS 332
Gene Ontology
GO:0048046
; C:apoplast; IDA:TAIR.
GO:0009570
; C:chloroplast stroma; IDA:TAIR.
GO:0005634
; C:nucleus; IDA:TAIR.
GO:0005886
; C:plasma membrane; IDA:TAIR.
GO:0009506
; C:plasmodesma; IDA:TAIR.
GO:0005774
; C:vacuolar membrane; IDA:TAIR.
GO:0030060
; F:L-malate dehydrogenase activity; IEA:EC.
GO:0044262
; P:cellular carbohydrate metabolic process; IEA:InterPro.
GO:0006108
; P:malate metabolic process; IEA:InterPro.
GO:0046686
; P:response to cadmium ion; IEP:TAIR.
GO:0009651
; P:response to salt stress; IEP:TAIR.
GO:0010043
; P:response to zinc ion; IEP:TAIR.
GO:0006099
; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
Interpro
IPR001557
; L-lactate/malate_DH.
IPR022383
; Lactate/malate_DH_C.
IPR001236
; Lactate/malate_DH_N.
IPR015955
; Lactate_DH/Glyco_Ohase_4_C.
IPR001252
; Malate_DH_AS.
IPR011274
; Malate_DH_NAD-dep_euk.
IPR010945
; Malate_DH_type2.
IPR016040
; NAD(P)-bd_dom.
Pfam
PF02866
; Ldh_1_C
PF00056
; Ldh_1_N
SMART
PROSITE
PS00068
; MDH
PRINTS