CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005190
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cofilin-1 
Protein Synonyms/Alias
 18 kDa phosphoprotein; p18; Cofilin, non-muscle isoform 
Gene Name
 CFL1 
Gene Synonyms/Alias
 CFL 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
13AVSDGVIKVFNDMKVacetylation[1]
13AVSDGVIKVFNDMKVubiquitination[2, 3, 4, 5]
19IKVFNDMKVRKSSTPacetylation[1]
19IKVFNDMKVRKSSTPubiquitination[3, 4, 5, 6, 7]
30SSTPEEVKKRKKAVLacetylation[8]
33PEEVKKRKKAVLFCLubiquitination[4]
34EEVKKRKKAVLFCLSubiquitination[4]
45FCLSEDKKNIILEEGubiquitination[6]
53NIILEEGKEILVGDVubiquitination[4, 6]
73DPYATFVKMLPDKDCacetylation[1]
73DPYATFVKMLPDKDCubiquitination[3, 5, 6, 7]
92YDATYETKESKKEDLacetylation[1]
92YDATYETKESKKEDLubiquitination[2, 4, 5, 6, 7]
95TYETKESKKEDLVFIubiquitination[4, 7]
96YETKESKKEDLVFIFubiquitination[4, 6, 7]
112APESAPLKSKMIYASubiquitination[2, 3, 4, 5, 6, 7, 9]
114ESAPLKSKMIYASSKacetylation[1]
114ESAPLKSKMIYASSKubiquitination[3, 4, 5, 6, 7]
121KMIYASSKDAIKKKLacetylation[1]
121KMIYASSKDAIKKKLubiquitination[4, 7, 10]
127SKDAIKKKLTGIKHEubiquitination[3, 5]
132KKKLTGIKHELQANCacetylation[11, 12]
132KKKLTGIKHELQANCubiquitination[4]
144ANCYEEVKDRCTLAEacetylation[1]
144ANCYEEVKDRCTLAEubiquitination[4, 6, 7, 10]
164AVISLEGKPL*****ubiquitination[6, 7]
Reference
 [1] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [2] Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level.
 Danielsen JM, Sylvestersen KB, Bekker-Jensen S, Szklarczyk D, Poulsen JW, Horn H, Jensen LJ, Mailand N, Nielsen ML.
 Mol Cell Proteomics. 2011 Mar;10(3):M110.003590. [PMID: 21139048]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [4] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [5] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [6] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [7] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [8] Spermidine and resveratrol induce autophagy by distinct pathways converging on the acetylproteome.
 Morselli E, Mariño G, Bennetzen MV, Eisenberg T, Megalou E, Schroeder S, Cabrera S, Bénit P, Rustin P, Criollo A, Kepp O, Galluzzi L, Shen S, Malik SA, Maiuri MC, Horio Y, López-Otín C, Andersen JS, Tavernarakis N, Madeo F, Kroemer G.
 J Cell Biol. 2011 Feb 21;192(4):615-29. [PMID: 21339330]
 [9] Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling.
 Xu G, Paige JS, Jaffrey SR.
 Nat Biotechnol. 2010 Aug;28(8):868-73. [PMID: 20639865]
 [10] Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels.
 Lee KA, Hammerle LP, Andrews PS, Stokes MP, Mustelin T, Silva JC, Black RA, Doedens JR.
 J Biol Chem. 2011 Dec 2;286(48):41530-8. [PMID: 21987572]
 [11] Substrate and functional diversity of lysine acetylation revealed by a proteomics survey.
 Kim SC, Sprung R, Chen Y, Xu Y, Ball H, Pei J, Cheng T, Kho Y, Xiao H, Xiao L, Grishin NV, White M, Yang XJ, Zhao Y.
 Mol Cell. 2006 Aug;23(4):607-18. [PMID: 16916647]
 [12] Proteome-wide prediction of acetylation substrates.
 Basu A, Rose KL, Zhang J, Beavis RC, Ueberheide B, Garcia BA, Chait B, Zhao Y, Hunt DF, Segal E, Allis CD, Hake SB.
 Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13785-90. [PMID: 19666589
Functional Description
 Binds to F-actin and exhibits pH-sensitive F-actin depolymerizing activity. Regulates actin cytoskeleton dynamics. Important for normal progress through mitosis and normal cytokinesis. Plays a role in the regulation of cell morphology and cytoskeletal organization. 
Sequence Annotation
 DOMAIN 4 153 ADF-H.
 MOTIF 30 34 Nuclear localization signal (Potential).
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 3 3 Phosphoserine; by NRK.
 MOD_RES 8 8 Phosphoserine (By similarity).
 MOD_RES 13 13 N6-acetyllysine.
 MOD_RES 25 25 Phosphothreonine.
 MOD_RES 68 68 Phosphotyrosine.
 MOD_RES 73 73 N6-acetyllysine.
 MOD_RES 140 140 Phosphotyrosine.
 MOD_RES 144 144 N6-acetyllysine.
 MOD_RES 156 156 Phosphoserine.  
Keyword
 3D-structure; Acetylation; Actin-binding; Cell membrane; Cell projection; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Membrane; Nucleus; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 166 AA 
Protein Sequence
MASGVAVSDG VIKVFNDMKV RKSSTPEEVK KRKKAVLFCL SEDKKNIILE EGKEILVGDV 60
GQTVDDPYAT FVKMLPDKDC RYALYDATYE TKESKKEDLV FIFWAPESAP LKSKMIYASS 120
KDAIKKKLTG IKHELQANCY EEVKDRCTLA EKLGGSAVIS LEGKPL 166 
Gene Ontology
 GO:0030864; C:cortical actin cytoskeleton; IEA:Compara.
 GO:0005737; C:cytoplasm; TAS:UniProtKB.
 GO:0031258; C:lamellipodium membrane; IEA:UniProtKB-SubCell.
 GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.
 GO:0005634; C:nucleus; TAS:UniProtKB.
 GO:0032587; C:ruffle membrane; IEA:UniProtKB-SubCell.
 GO:0030036; P:actin cytoskeleton organization; TAS:ProtInc.
 GO:0030042; P:actin filament depolymerization; IEA:InterPro.
 GO:0007411; P:axon guidance; TAS:Reactome.
 GO:0000910; P:cytokinesis; IEA:Compara.
 GO:0030010; P:establishment of cell polarity; IEA:Compara.
 GO:0038096; P:Fc-gamma receptor signaling pathway involved in phagocytosis; TAS:Reactome.
 GO:0045087; P:innate immune response; TAS:Reactome.
 GO:0043066; P:negative regulation of apoptotic process; TAS:UniProtKB.
 GO:0001755; P:neural crest cell migration; IEA:Compara.
 GO:0001842; P:neural fold formation; IEA:Compara.
 GO:0030168; P:platelet activation; TAS:Reactome.
 GO:0002576; P:platelet degranulation; TAS:Reactome.
 GO:0030836; P:positive regulation of actin filament depolymerization; IEA:Compara.
 GO:0006468; P:protein phosphorylation; IEA:Compara.
 GO:0022604; P:regulation of cell morphogenesis; IMP:UniProtKB.
 GO:0043200; P:response to amino acid stimulus; IEA:Compara.
 GO:0009615; P:response to virus; IEP:UniProtKB.
 GO:0007266; P:Rho protein signal transduction; TAS:ProtInc. 
Interpro
 IPR002108; Actin-bd_cofilin/tropomyosin.
 IPR017904; ADF/Cofilin/Destrin.
 IPR027234; Cofilin_1/2. 
Pfam
 PF00241; Cofilin_ADF 
SMART
 SM00102; ADF 
PROSITE
 PS51263; ADF_H 
PRINTS
 PR00006; COFILIN.