| Tag | Content |
|---|
| CPLM ID | CPLM-010525 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | Histone H2B |
Protein Synonyms/Alias | |
Gene Name | |
Gene Synonyms/Alias | |
Created Date | July 27, 2013 |
Organism | Litopenaeus vannamei (Whiteleg shrimp) (Penaeus vannamei) |
NCBI Taxa ID | 6689 |
Lysine Modification | Position | Peptide | Type | References |
|---|
| 4 | ****TSGKAAKKAGK | acetylation | [1] | | 11 | KAAKKAGKAQKSITK | acetylation | [1] | | 14 | KKAGKAQKSITKGDK | acetylation | [1] |
|
Reference | [1] Characterization of antimicrobial histone sequences and posttranslational modifications by mass spectrometry. Ouvry-Patat SA, Schey KL. J Mass Spectrom. 2007 May;42(5):664-74. [ PMID: 17405180] |
Functional Description | Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. |
Sequence Annotation | MOD_RES 4 4 N6-acetyllysine.
MOD_RES 11 11 N6-acetyllysine.
MOD_RES 14 14 N6-acetyllysine.
CARBOHYD 103 103 O-linked (GlcNAc...) (By similarity).
CROSSLNK 111 111 Glycyl lysine isopeptide (Lys-Gly) |
Keyword | Acetylation; Antibiotic; Antimicrobial; Chromosome; Direct protein sequencing; DNA-binding; Glycoprotein; Isopeptide bond; Nucleosome core; Nucleus; Ubl conjugation. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 116 AA |
Protein Sequence | TSGKAAKKAG KAQKSITKGD KKKRKESYSI YIYKVLKQVH PDTGISSKAM SIMNSFVNDI 60
FERIAAEASR LAHYNKRSTI TSREIQTAVR LLLPGELAKH AVSEGTKAVT KYTSSK 116 |
Gene Ontology | |
Interpro | |
Pfam | |
SMART | |
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PRINTS | |