CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005406
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Proline utilization trans-activator 
Protein Synonyms/Alias
  
Gene Name
 PUT3 
Gene Synonyms/Alias
 YKL015W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
74KKIVVSTKYLQQLQKacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Positive activator of the proline utilization pathway. Binds to the promoters of PUT1 and PUT2 genes. Recognizes and binds to the DNA sequence 5'-CGG-N(10)-CCG-3'. 
Sequence Annotation
 DNA_BIND 34 60 Zn(2)-C6 fungal-type.
 METAL 34 34 Zinc 1.
 METAL 34 34 Zinc 2.
 METAL 37 37 Zinc 1.
 METAL 44 44 Zinc 1.
 METAL 50 50 Zinc 1.
 METAL 50 50 Zinc 2.
 METAL 53 53 Zinc 2.
 METAL 60 60 Zinc 2.  
Keyword
 3D-structure; Activator; Complete proteome; DNA-binding; Metal-binding; Nucleus; Proline metabolism; Reference proteome; Transcription; Transcription regulation; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 979 AA 
Protein Sequence
MVTDQGSRHS IQSKQPAYVN KQPQKRQQRS SVACLSCRKR HIKCPGGNPC QKCVTSNAIC 60
EYLEPSKKIV VSTKYLQQLQ KDLNDKTEEN NRLKALLLER PVSVRGKDNS DDDERHINNA 120
PSSDTLEVSS APAAPIFDLM SNSNTASDND NDDDNSNRIT NNRSYDHSLE KYYKKAISIF 180
KQPANANGEN GNGANGHEDD DEDDEEISTN FAQRSGRLIE SHNGFHYFVG SSSMTLFGLE 240
IQSLVTKYIS VKNFRPLPIN TKNKILNSNL NPAISSFINS NNYLFSSYNF LNPISTIVNL 300
NSINDNLSPL MFKIILKSDT DGSSGQEEVI QFQLPSYNYT KLLIDCFINY NDGCFYFFNE 360
GLVKCGINKL YLENKWLYYD NTKKALDNEN DPILQAVWFC KILLILAVGE MYLGSINNEM 420
LKNYSNQPKL PGSKFFQMGS KIFNCLFSSE RLENVTKKGG IEVLLLYAFF LQVADYTLAS 480
YFYFGQALRT CLILGLHVDS QSDTLSRYEI EHHRRLWWTV YMFERMLSSK AGLPLSFTDY 540
TISTALPADI DDETIEEKNS HYVFRKAELI SNCVTIVKIN AQILSKLYQR QPETNIIITL 600
KVVIKQLLEW RNNLSDSLQV DFTQKDEDFK ISRLSTNMFT EYFQGINLAV RPLLFHFASI 660
QLKRFKTSNT FVNLQNYSAT ISSLLTCSLH ASVNTIRSLW SLLQNSMLAM FSYMDREYLF 720
TSSCTLLLFN TAFGIHEQTL YHLDHSLEIF TQMRNLGNIP AGLRRAQLLT LMANLDFHGI 780
MNDLITKYND ILKFDSMNCE NDNIVEDSNE PKRETEKCKP HKDGDRIDPS IIDCDKSNTN 840
TNMIKNESIS NIVSILPEGA KPTLTDYSNG NNDVNDINVN NSEPSTFFDI ITASLENSYQ 900
TTLTEKGSQV MEKNMDQLDS VHNLNDDDLQ QLLEDLGNID HSDEKLWKEI TDQAMWLGNT 960
MDPTAAAGSE IDFTDYLGP 979 
Gene Ontology
 GO:0005634; C:nucleus; IC:SGD.
 GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:SGD.
 GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IMP:SGD.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:2001158; P:positive regulation of proline catabolic process to glutamate; IMP:SGD.
 GO:0006560; P:proline metabolic process; IEA:UniProtKB-KW.
 GO:0000972; P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD. 
Interpro
 IPR007219; Transcription_factor_fun.
 IPR001138; Zn2-C6_fun-type_DNA-bd. 
Pfam
 PF04082; Fungal_trans
 PF00172; Zn_clus 
SMART
 SM00906; Fungal_trans
 SM00066; GAL4 
PROSITE
 PS00463; ZN2_CY6_FUNGAL_1
 PS50048; ZN2_CY6_FUNGAL_2 
PRINTS