CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005394
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 S-(hydroxymethyl)glutathione dehydrogenase 
Protein Synonyms/Alias
 Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH 
Gene Name
 frmA 
Gene Synonyms/Alias
 adhC; b0356; JW0347 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
13AVAFAPGKPLEIVEIacetylation[1]
13AVAFAPGKPLEIVEIpupylation[2]
222IAIDTNPKKFDLARRacetylation[1]
243INPNDYDKPIKDVLLacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Reconstitution of the Mycobacterium tuberculosis pupylation pathway in Escherichia coli.
 Cerda-Maira FA, McAllister F, Bode NJ, Burns KE, Gygi SP, Darwin KH.
 EMBO Rep. 2011 Jul 8;12(8):863-70. [PMID: 21738222
Functional Description
 Has high formaldehyde dehydrogenase activity in the presence of glutathione and catalyzes the oxidation of normal alcohols in a reaction that is not GSH-dependent. In addition, hemithiolacetals other than those formed from GSH, including omega-thiol fatty acids, also are substrates. 
Sequence Annotation
 METAL 40 40 Zinc 1; catalytic (By similarity).
 METAL 62 62 Zinc 1; catalytic (By similarity).
 METAL 92 92 Zinc 2 (By similarity).
 METAL 95 95 Zinc 2 (By similarity).
 METAL 98 98 Zinc 2 (By similarity).
 METAL 106 106 Zinc 2 (By similarity).
 METAL 169 169 Zinc 1; catalytic (By similarity).  
Keyword
 Complete proteome; Cytoplasm; Direct protein sequencing; Metal-binding; NAD; Oxidoreductase; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 369 AA 
Protein Sequence
MKSRAAVAFA PGKPLEIVEI DVAPPKKGEV LIKVTHTGVC HTDAFTLSGD DPEGVFPVVL 60
GHEGAGVVVE VGEGVTSVKP GDHVIPLYTA ECGECEFCRS GKTNLCVAVR ETQGKGLMPD 120
GTTRFSYNGQ PLYHYMGCST FSEYTVVAEV SLAKINPEAN HEHVCLLGCG VTTGIGAVHN 180
TAKVQPGDSV AVFGLGAIGL AVVQGARQAK AGRIIAIDTN PKKFDLARRF GATDCINPND 240
YDKPIKDVLL DINKWGIDHT FECIGNVNVM RAALESAHRG WGQSVIIGVA VAGQEISTRP 300
FQLVTGRVWK GSAFGGVKGR SQLPGMVEDA MKGDIDLEPF VTHTMSLDEI NDAFDLMHEG 360
KSIRTVIRY 369 
Gene Ontology
 GO:0005829; C:cytosol; IDA:UniProtKB.
 GO:0004024; F:alcohol dehydrogenase activity, zinc-dependent; IDA:EcoliWiki.
 GO:0051903; F:S-(hydroxymethyl)glutathione dehydrogenase activity; IDA:EcoliWiki.
 GO:0008270; F:zinc ion binding; IDA:EcoliWiki.
 GO:0006069; P:ethanol oxidation; IEA:InterPro.
 GO:0046294; P:formaldehyde catabolic process; IMP:EcoliWiki. 
Interpro
 IPR014183; ADH_3.
 IPR013149; ADH_C.
 IPR013154; ADH_GroES-like.
 IPR002085; ADH_SF_Zn-type.
 IPR002328; ADH_Zn_CS.
 IPR011032; GroES-like.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF08240; ADH_N
 PF00107; ADH_zinc_N 
SMART
  
PROSITE
 PS00059; ADH_ZINC 
PRINTS