CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-034686
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein RGD1563668 
Protein Synonyms/Alias
  
Gene Name
 RGD1563668 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
12DPKKLRGKMSSYAFFacetylation[1]
177AAKKGVVKAEKSKKKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 211 AA 
Protein Sequence
MGKGDPKKLR GKMSSYAFFV QTCREEHKKK HPDASVNFSE FSKKCSERWK TMSAKEKGKF 60
EDMAKADKAR YEREMKTYIS PKGETKKKFK DPNAPKTPPS AFFLFCSEYR PKIKGEHPGL 120
SIGDVVKKLG EMWTNTAADD KQPYEKMAAK LKEKYEKDIA AYRAKGKPDA AKKGVVKAEK 180
SKKKKEEEDD EEDEEDEEEE EEEDEEDDDD E 211 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro. 
Interpro
 IPR009071; HMG_box_dom.
 IPR017967; HMG_boxA_CS. 
Pfam
 PF09011; DUF1898
 PF00505; HMG_box 
SMART
 SM00398; HMG 
PROSITE
 PS00353; HMG_BOX_1
 PS50118; HMG_BOX_2 
PRINTS