CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-032160
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein SCAF8 
Protein Synonyms/Alias
 cDNA FLJ55884, highly similar to RNA-binding protein 16 
Gene Name
 SCAF8 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
185RVLNLWQKNNVFKSEubiquitination[1, 2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1337 AA 
Protein Sequence
MPQPLLPALP PLSSPSGAGS CGPSGGECSG RRLFRRRARG LRSDNMEAVK TFNSEDCAST 60
PACTDCFSSS MDTRSILYSL NDYKPPISKA KMTQITKAAI KAIKFYKHVV QSVEKFIQKC 120
KPEYKVPGLY VIDSIVRQSR HQFGQEKDVF APRFSNNIIS TFQNLYRCPG DDKSKIVRVL 180
NLWQKNNVFK SEIIQPLLDM AAGIPPPVVT PVLASTTTAM SNTPGTPVTP VTPANVVQGL 240
PDPWVSQITN TDTLAAVAQI LQSPQGQQLQ QLIQTLQIQQ QKPQPSILQA LDAGLVVQLQ 300
ALTAQLTAAA AAANTLTPLE QGVSFNKKLM DRFDFGEDSE HSEEPKKEIP ASQLSHVSES 360
VNNSIFHQIA EQLQQQNLEH LRQQLLEQQQ PQKATPQDSQ EGTFGSEHSA SPSQGSSQQH 420
FLEPEVNLDD SIDIQQQDMD IDEGQDGVEE EVFEQEAKKV AVRSRSRTHS RSRSRSPRKR 480
RSRSRSGSRK RKHRKRSRSR SRERKRKSSR SYSSERRARE REKERQKKGL PPIRSKTLSV 540
CSTTLWVGQV DKKATQQDLT NLFEEFGQIE SINMIPPRGC AYVCMVHRQD AFRALQKLSS 600
GSYKIGSKVI KIAWALNKGV KTEYKQFWDV DLGVTYIPWE KVKVDDLEGF AEGGMIDQET 660
VNTEWETVKS SEPVKETVQT TQSPTPVEKE TVVTTQAEVF PPPVAMLQIP VAPAVPTVSL 720
VPPAFPVSMP VPPPGFSPIP PPPFLRASFN PSQPPPGFMP PPVPPPVVPP PTIPPVVPTS 780
LVQPSLSMTP ETVKDVGFGS LVIPGGSVAS NLATSALPAG NVFNAPTKQA EPEEKVPHLI 840
DHQISSGENT RSVIPNDISS NAAILGGQPP NVTSNSGILG VQRPNVSSNS EILGVRPSNV 900
SSSSGIIAAQ PPNILNNSGI LGIQPPSVSN SSGLLGVLPP NIPNNSGLVG VQPPNVPNTP 960
GLLGTQPPAG PQNLPPLSIP NQRMPTMPML DIRPGLIPQA PGPRFPLIQP GIPPQRGIPP 1020
PSVLDSALHP PPRGPFPPGD IFSQPERPFL APGRQSVDNV TNPEKRIPLG NDNIQQEGDR 1080
DYRFPPIETR ESISRPPPVD VRDVVGRPID PREGPGRPPL DGRDHFGRPP VDIRENLVRP 1140
GIDHLGRRDH FGFNPEKPWG HRGDFDEREH RVLPVYGGPK GLHEERGRFR SGNYRFDPRS 1200
GPWNRGFGQE VHRDFDDRRR PWERQRDRDD RDFDFCREMN GNRLGRDRIQ NTWVPPPHAR 1260
VFDYFEGATS QRKGDNVPQV NGENTERHAQ PPPIPVQNDP ELYEKLTSSN EINKEKSDTV 1320
ADIESEPVVE STETEGT 1337 
Gene Ontology
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro. 
Interpro
 IPR006569; CID_dom.
 IPR008942; ENTH_VHS.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR006903; RNA_pol_II-bd.
 IPR000504; RRM_dom. 
Pfam
 PF04818; CTD_bind
 PF00076; RRM_1 
SMART
 SM00582; RPR
 SM00360; RRM 
PROSITE
 PS51391; CID
 PS50102; RRM 
PRINTS