CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013062
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Lamin-B receptor 
Protein Synonyms/Alias
 Integral nuclear envelope inner membrane protein 
Gene Name
 Lbr 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
5***MPSRKFVEGEVVacetylation[1, 2]
5***MPSRKFVEGEVVubiquitination[3]
42QLYTVKYKDGTELELubiquitination[3]
133KLTPLVLKPFGNSVSubiquitination[3]
151GEPEHMEKNATPYKDubiquitination[3]
188RREEVKAKEIESEEQacetylation[2]
188RREEVKAKEIESEEQubiquitination[3]
612KYGLAWEKYCQRVPYacetylation[1, 2, 4]
612KYGLAWEKYCQRVPYubiquitination[3]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [3] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [4] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
 Anchors the lamina and the heterochromatin to the inner nuclear membrane (By similarity). 
Sequence Annotation
 DOMAIN 1 62 Tudor.
 MOD_RES 55 55 N6-acetyllysine (By similarity).
 MOD_RES 71 71 Phosphoserine; by CDK1 (By similarity).
 MOD_RES 86 86 Phosphoserine; by CDK1 (By similarity).
 MOD_RES 90 90 Phosphoserine (By similarity).
 MOD_RES 101 101 Phosphoserine.
 MOD_RES 103 103 Phosphoserine.
 MOD_RES 128 128 Phosphothreonine (By similarity).
 MOD_RES 605 605 N6-acetyllysine (By similarity).
 MOD_RES 612 612 N6-acetyllysine (By similarity).
 CARBOHYD 98 98 O-linked (GlcNAc) (By similarity).  
Keyword
 Acetylation; Complete proteome; DNA-binding; Glycoprotein; Membrane; Nucleus; Phosphoprotein; Receptor; Reference proteome; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 626 AA 
Protein Sequence
MPSRKFVEGE VVRGRWPGSS LYYEVEILSH DNKSQLYTVK YKDGTELELK ESDIKPLKSF 60
KQRKSGSISS SPSRRRGSRS RSRSRSRSRS PGRAPKGSRR SVSASHEGDV KEKKEKEMRR 120
EILQVKLTPL VLKPFGNSVS VYNGEPEHME KNATPYKDKQ ERIILSTEDR YIVTQYSLRP 180
RREEVKAKEI ESEEQNLVTK GPAPLGTFQV TTPQRKDLEF GGVPGAVLIM LGLPACVLLL 240
LLQCRQKDPG LLHFPPPLPA LHELWEPRVC GVYLLWFFVQ ALFHLLPVGK VAEGTPLVDG 300
RRLQYRLNGL YAFILTSAAL GAAVFWGVEL CYLYTHFLQL ALAATGFSVL LSAYLYVRSL 360
RAPREELSPA SSGNAVYDFF IGRELNPRLG AFDLKFFCEL RPGLIGWVVI NLVMLLMEMK 420
IQERAAPSLA MILVNSFQLL YVVDALWNEE ALLTSMDIMH DGFGFMLAFG DLVWVPFTYS 480
LQAFYLVSHP HDLSWPLASV IIALKLCGYV IFRCANSQKN AFRKNPTDPK LAHLKTIHTS 540
TGKSLLVSGW WGFVRHPNYL GDLIMALAWS LPCGFNHLLP YFYIIYFTAL LIHREARDEH 600
QCRRKYGLAW EKYCQRVPYR IFPYIY 626 
Gene Ontology
 GO:0016021; C:integral to membrane; ISO:MGI.
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0005637; C:nuclear inner membrane; TAS:MGI.
 GO:0005652; C:nuclear lamina; TAS:MGI.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0016628; F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; IEA:InterPro. 
Interpro
 IPR001171; Ergosterol_biosynth_ERG4_ERG24.
 IPR019023; Lamin-B_rcpt_of_tudor.
 IPR018083; Sterol_reductase_CS.
 IPR002999; Tudor. 
Pfam
 PF01222; ERG4_ERG24
 PF09465; LBR_tudor 
SMART
 SM00333; TUDOR 
PROSITE
 PS01017; STEROL_REDUCT_1
 PS01018; STEROL_REDUCT_2
 PS50304; TUDOR 
PRINTS