CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003547
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA topoisomerase 4 subunit A 
Protein Synonyms/Alias
 Topoisomerase IV subunit A 
Gene Name
 parC 
Gene Synonyms/Alias
 b3019; JW2987 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
323FATTDLEKSYRINLNacetylation[1]
368RLNYRLEKVLKRLHIacetylation[1]
514MGWVRSAKGHDIDAPacetylation[1]
526DAPGLNYKAGDSFKAacetylation[1]
665SDLPQLSKGKGNKIIacetylation[1]
716LRPEELQKVTGERGRacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule. MukB stimulates the relaxation activity of topoisomerase IV and also has a modest effect on decatenation. 
Sequence Annotation
 REGION 497 752 Sufficient for MukB binding.
 ACT_SITE 120 120 O-(5'-phospho-DNA)-tyrosine intermediate  
Keyword
 3D-structure; Cell membrane; Complete proteome; Direct protein sequencing; DNA-binding; Isomerase; Membrane; Reference proteome; Topoisomerase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 752 AA 
Protein Sequence
MSDMAERLAL HEFTENAYLN YSMYVIMDRA LPFIGDGLKP VQRRIVYAMS ELGLNASAKF 60
KKSARTVGDV LGKYHPHGDS ACYEAMVLMA QPFSYRYPLV DGQGNWGAPD DPKSFAAMRY 120
TESRLSKYSE LLLSELGQGT ADWVPNFDGT LQEPKMLPAR LPNILLNGTT GIAVGMATDI 180
PPHNLREVAQ AAIALIDQPK TTLDQLLDIV QGPDYPTEAE IITSRAEIRK IYENGRGSVR 240
MRAVWKKEDG AVVISALPHQ VSGARVLEQI AAQMRNKKLP MVDDLRDESD HENPTRLVIV 300
PRSNRVDMDQ VMNHLFATTD LEKSYRINLN MIGLDGRPAV KNLLEILSEW LVFRRDTVRR 360
RLNYRLEKVL KRLHILEGLL VAFLNIDEVI EIIRNEDEPK PALMSRFGLT ETQAEAILEL 420
KLRHLAKLEE MKIRGEQSEL EKERDQLQGI LASERKMNNL LKKELQADAQ AYGDDRRSPL 480
QEREEAKAMS EHDMLPSEPV TIVLSQMGWV RSAKGHDIDA PGLNYKAGDS FKAAVKGKSN 540
QPVVFVDSTG RSYAIDPITL PSARGQGEPL TGKLTLPPGA TVDHMLMESD DQKLLMASDA 600
GYGFVCTFND LVARNRAGKA LITLPENAHV MPPVVIEDAS DMLLAITQAG RMLMFPVSDL 660
PQLSKGKGNK IINIPSAEAA RGEDGLAQLY VLPPQSTLTI HVGKRKIKLR PEELQKVTGE 720
RGRRGTLMRG LQRIDRVEID SPRRASSGDS EE 752 
Gene Ontology
 GO:0005694; C:chromosome; IEA:InterPro.
 GO:0005737; C:cytoplasm; IDA:EcoliWiki.
 GO:0009330; C:DNA topoisomerase complex (ATP-hydrolyzing); IDA:EcoliWiki.
 GO:0019897; C:extrinsic to plasma membrane; IDA:EcoliWiki.
 GO:0009295; C:nucleoid; IBA:RefGenome.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0003918; F:DNA topoisomerase type II (ATP-hydrolyzing) activity; IBA:RefGenome.
 GO:0006265; P:DNA topological change; IDA:EcoliWiki.
 GO:0030541; P:plasmid partitioning; IDA:EcoliWiki.
 GO:0007062; P:sister chromatid cohesion; IMP:EcoliWiki. 
Interpro
 IPR024946; Arg_repress_C-like.
 IPR006691; GyrA/parC_pinwhl.
 IPR002205; Topo_IIA_A/C.
 IPR013758; Topo_IIA_A/C_ab.
 IPR013760; Topo_IIA_like_dom.
 IPR005742; TopoIV_A_Gneg. 
Pfam
 PF03989; DNA_gyraseA_C
 PF00521; DNA_topoisoIV 
SMART
 SM00434; TOP4c 
PROSITE
  
PRINTS