UniProt Accession

 RALY_MOUSE; Q64012; A2AU63; Q99K76; Q9CXH8; Q9QZX6 

Genbank Protein ID

 S72641; L17076; AK014356; AL929024; BC004851; BC016587; AF148458 

Genbank Nucleotide ID

 AAC60688.1; BAB29294.1; CAM25655.1; AAH04851.1; AAH16587.1; AAF04488.1 

Protein Name

 RNA-binding protein Raly 

Protein Synonyms/Alias

 Maternally-expressed hnRNP C-related protein; hnRNP associated with lethal yellow protein 

Gene Name

 Raly 

Gene Synonyms/Alias

 Merc 

Created Date

 July 27, 2013 

Organism

 Mus musculus (Mouse) 

NCBI Taxa ID

 10090 

Lysine Modification

Position	Peptide	Type	References
165	VKTTIPVKLFARSTA	ubiquitination	[1]
179	AVTTGSAKIKLKSSE	ubiquitination	[1]
183	GSAKIKLKSSELQTI	ubiquitination	[1]
216	EQIAEEQKANPDGKK	ubiquitination	[1]

Reference

 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 

Functional Description

 Probable-RNA binding protein. Could be a heterogeneous nuclear ribonucleoprotein (hnRNP). May be involved in pre-mRNA splicing (By similarity). 

Sequence Annotation

 DOMAIN 21 92 RRM.
 MOD_RES 135 135 Phosphoserine.
 MOD_RES 165 165 N6-acetyllysine (By similarity).
 MOD_RES 268 268 Phosphothreonine.
 MOD_RES 270 270 Phosphoserine.
 MOD_RES 274 274 Phosphothreonine.
 MOD_RES 292 292 Phosphothreonine.
 MOD_RES 294 294 Phosphoserine (By similarity).
 MOD_RES 301 301 Phosphoserine (By similarity).
 MOD_RES 304 304 Phosphothreonine.  

Keyword

 Acetylation; Alternative splicing; Complete proteome; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Ribonucleoprotein; RNA-binding; Spliceosome. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 312 AA 

Protein Sequence

Gene Ontology

 GO:0071013; C:catalytic step 2 spliceosome; IEA:Compara.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. 

Interpro

 IPR017347; hnRNP_C_Raly.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 

Pfam

 PF00076; RRM_1 

SMART

 SM00360; RRM 

PROSITE

 PS50102; RRM 

PRINTS