CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042654
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Pachytene checkpoint protein 2 homolog 
Protein Synonyms/Alias
  
Gene Name
 TRIP13 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
31IEVSTAKKEDINLSVubiquitination[1]
77SIIDTELKVKDSQPIubiquitination[2]
181HGPPGTGKTSLCKALubiquitination[1, 3]
191LCKALAQKLTIRLSSubiquitination[1]
223KWFSESGKLVTKMFQubiquitination[1, 3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 249 AA 
Protein Sequence
XGVGGTQRRG QTFTDPPYVH GGWIEVSTAK KEDINLSVRK LLNRHNIVFG DYTWTEFDEP 60
FLTRNVQSVS IIDTELKVKD SQPIDLSACT VALHIFQLNE DGPSSENLEE ETENIIAANH 120
WVLPAAEFHG LWDSLVYDVE VKSHLLDYVM TTLLFSDKNV NSNLITWNRV VLLHGPPGTG 180
KTSLCKALAQ KLTIRLSSRY RYGQLIEINS HSLFSKWFSE SGKLVTKMFQ KIQDLIDDKD 240
ALVFVLIDE 249 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:InterPro. 
Interpro
 IPR003959; ATPase_AAA_core.
 IPR027417; P-loop_NTPase. 
Pfam
 PF00004; AAA 
SMART
  
PROSITE
  
PRINTS