CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023698
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Polymerase delta-interacting protein 2 
Protein Synonyms/Alias
 38 kDa DNA polymerase delta interaction protein; p38 
Gene Name
 POLDIP2 
Gene Synonyms/Alias
 PDIP38; POLD4; HSPC017 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
223TLRAWQEKNHPWLELubiquitination[1, 2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
  
Sequence Annotation
 DOMAIN 235 360 ApaG.  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 368 AA 
Protein Sequence
MAACTARRAL AVGSRWWSRS LTGARWPRPL CAAAGAGAFS PASTTTTRRH LSSRNRPEGK 60
VLETVGVFEV PKQNGKYETG QLFLHSIFGY RGVVLFPWQA RLYDRDVASA APEKAENPAG 120
HGSKEVKGKT HTYYQVLIDA RDCPHISQRS QTEAVTFLAN HDDSRALYAI PGLDYVSHED 180
ILPYTSTDQV PIQHELFERF LLYDQTKAPP FVARETLRAW QEKNHPWLEL SDVHRETTEN 240
IRVTVIPFYM GMREAQNSHV YWWRYCIRLE NLDSDVVQLR ERHWRIFSLS GTLETVRGRG 300
VVGREPVLSK EQPAFQYSSH VSLQASSGHM WGTFRFERPD GSHFDVRIPP FSLESNKDEK 360
TPPSGLHW 368 
Gene Ontology
 GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:InterPro. 
Interpro
 IPR007474; ApaG_domain.
 IPR011722; Hemimethylated_DNA-bd_dom. 
Pfam
 PF04379; DUF525 
SMART
 SM00992; YccV-like 
PROSITE
 PS51087; APAG 
PRINTS