CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-034641
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Uncharacterized protein 
Protein Synonyms/Alias
  
Gene Name
 RGD1562399 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
32RGGKAEDKEWIPVTKacetylation[1]
32RGGKAEDKEWIPVTKubiquitination[2]
39KEWIPVTKLGRLVKDacetylation[1]
39KEWIPVTKLGRLVKDubiquitination[2]
45TKLGRLVKDMKIKSLacetylation[1]
48GRLVKDMKIKSLEEIacetylation[1]
235WKETVFTKSPYQEFTacetylation[1]
247EFTDHLVKTHTRVSVacetylation[1]
247EFTDHLVKTHTRVSVubiquitination[2]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405]
 [2] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Ribonucleoprotein; Ribosomal protein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 265 AA 
Protein Sequence
MADDACAAGG PGGPGGPGLG GRGARGGKAE DKEWIPVTKL GRLVKDMKIK SLEEIYLFSL 60
PLKESEIIDF FLGASLKDEV LKIMPVQKQT RAGQRTRFKA YVAIGDYKGH VGLGVKCSKE 120
VATAIQGAII LAKLSPVRRG YWGNKIGKPH TVRCKVTGRC GSVLVDLIPA PRGTGIVSAL 180
VPKKLLMMAG IEDCYTSARG CTATLGNFAK ATFDAISKTY NYLTPDLWKE TVFTKSPYQE 240
FTDHLVKTHT RVSVQRTQAP AVATT 265 
Gene Ontology
 GO:0015935; C:small ribosomal subunit; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:InterPro.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:InterPro. 
Interpro
 IPR014720; dsRNA-bd-like_dom.
 IPR000851; Ribosomal_S5.
 IPR005324; Ribosomal_S5_C.
 IPR020568; Ribosomal_S5_D2-typ_fold.
 IPR014721; Ribosomal_S5_D2-typ_fold_subgr.
 IPR005711; Ribosomal_S5_euk/arc.
 IPR013810; Ribosomal_S5_N.
 IPR018192; Ribosomal_S5_N_CS. 
Pfam
 PF00333; Ribosomal_S5
 PF03719; Ribosomal_S5_C 
SMART
  
PROSITE
 PS00585; RIBOSOMAL_S5
 PS50881; S5_DSRBD 
PRINTS