CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005851
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Macrophage scavenger receptor types I and II 
Protein Synonyms/Alias
 Macrophage acetylated LDL receptor I and II; Scavenger receptor type A; SR-A; CD204 
Gene Name
 Msr1 
Gene Synonyms/Alias
 Scvr 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
27DCSSESVKFDARSMTubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Membrane glycoproteins implicated in the pathologic deposition of cholesterol in arterial walls during atherogenesis. Two types of receptor subunits exist. These receptors mediate the endocytosis of a diverse group of macromolecules, including modified low density lipoproteins (LDL). 
Sequence Annotation
 DOMAIN 277 350 Collagen-like.
 DOMAIN 357 457 SRCR.
 REGION 79 114 Spacer (Probable).
 MOD_RES 32 32 Phosphoserine.
 MOD_RES 34 34 Phosphothreonine.
 MOD_RES 36 36 Phosphoserine.
 MOD_RES 40 40 Phosphoserine.
 CARBOHYD 94 94 N-linked (GlcNAc...) (Potential).
 CARBOHYD 107 107 N-linked (GlcNAc...) (Potential).
 CARBOHYD 147 147 N-linked (GlcNAc...) (Potential).
 CARBOHYD 188 188 N-linked (GlcNAc...) (Potential).
 CARBOHYD 253 253 N-linked (GlcNAc...) (Potential).
 CARBOHYD 271 271 N-linked (GlcNAc...) (Potential).
 DISULFID 382 446 By similarity.
 DISULFID 395 456 By similarity.
 DISULFID 426 436 By similarity.  
Keyword
 Alternative splicing; Coiled coil; Collagen; Complete proteome; Disulfide bond; Endocytosis; Glycoprotein; LDL; Membrane; Phosphoprotein; Receptor; Reference proteome; Signal-anchor; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 458 AA 
Protein Sequence
MTKEMTENQR LCPHEQEDAD CSSESVKFDA RSMTASLPHS TKNGPSLQEK LKSFKAALIA 60
LYLLVFAVLI PVVGIVTAQL LNWEMKNCLV CSLNTSDTSQ GPMEKENTSK VEMRFTIIME 120
HMKDMEERIE SISNSKADLI DTERFQNFSM ATDQRLNDIL LQLNSLISSV QEHGNSLDAI 180
SKSLQSLNMT LLDVQLHTET LNVRVRESTA KQQEDISKLE ERVYKVSAEV QSVKEEQAHV 240
EQEVKQEVRV LNNITNDLRL KDWEHSQTLK NITFIQGPPG PQGEKGDRGL TGQTGPPGAP 300
GIRGIPGVKG DRGQIGFPGG RGNPGAPGKP GRSGSPGPKG QKGEKGSVGG STPLKTVRLV 360
GGSGAHEGRV EIFHQGQWGT ICDDRWDIRA GQVVCRSLGY QEVLAVHKRA HFGQGTGPIW 420
LNEVMCFGRE SSIENCKINQ WGVLSCSHSE DAGVTCTS 458 
Gene Ontology
 GO:0005581; C:collagen; IEA:UniProtKB-KW.
 GO:0031410; C:cytoplasmic vesicle; IEA:Compara.
 GO:0005829; C:cytosol; IEA:Compara.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0034362; C:low-density lipoprotein particle; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; IEA:Compara.
 GO:0030169; F:low-density lipoprotein particle binding; IMP:BHF-UCL.
 GO:0005044; F:scavenger receptor activity; IEA:InterPro.
 GO:0030301; P:cholesterol transport; IMP:BHF-UCL.
 GO:0042953; P:lipoprotein transport; IMP:MGI.
 GO:0034381; P:plasma lipoprotein particle clearance; IMP:BHF-UCL.
 GO:0010886; P:positive regulation of cholesterol storage; IMP:BHF-UCL.
 GO:0010744; P:positive regulation of macrophage derived foam cell differentiation; IGI:BHF-UCL.
 GO:0042221; P:response to chemical stimulus; IEA:Compara. 
Interpro
 IPR008160; Collagen.
 IPR003543; Macro_scav_rcpt.
 IPR001190; Srcr_rcpt.
 IPR017448; Srcr_rcpt-rel. 
Pfam
 PF01391; Collagen
 PF03523; Macscav_rec
 PF00530; SRCR 
SMART
 SM00202; SR 
PROSITE
 PS00420; SRCR_1
 PS50287; SRCR_2 
PRINTS
 PR01408; MACSCAVRCPTR.
 PR00258; SPERACTRCPTR.