CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-025211
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Putative uncharacterized protein 
Protein Synonyms/Alias
  
Gene Name
 Snd1 
Gene Synonyms/Alias
 AL033314 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
71AATQPDGKDTPDEPWubiquitination[1]
102VCFTIENKTPQGREYubiquitination[1]
177SHTIRDLKYTIENPRubiquitination[1]
249EPFAAEAKFFTESRLubiquitination[1]
389NIQDKNKKLRPLYDIubiquitination[1]
414RKKLIGKKVNVTVDYubiquitination[1]
513DISGDTQKAKQFLPFubiquitination[1]
515SGDTQKAKQFLPFLQubiquitination[1]
641AERSAYYKPLLSAEEubiquitination[1]
873RKEKQFQKVITEYLNubiquitination[1]
886LNAQESAKSARLNLWubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
  
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 910 AA 
Protein Sequence
MASSAQSSGS SGGPAVPTVQ RGIVKMVLSG CAIIVRGQPR GGPPPERQIN LSNIRAGNLA 60
RRAAATQPDG KDTPDEPWAF PAREFLRKKL IGKEVCFTIE NKTPQGREYG MIYLGKDTNG 120
ENIAESLVAE GLATRREGMR ANNPEQNRLS ECEEQAKASK KGMWSEGNGS HTIRDLKYTI 180
ENPRHFVDSH HQKPVNAIIE HVRGGSVVRA LLLPGHHLVT VMLSGIKCPT FRRETDGSET 240
PEPFAAEAKF FTESRLLQRD VQIILESCHN QNLLGTILHP NGNITELLLK EGFARCVDWS 300
IAVYTRGAEK LRAAERFAKE RRLRIWRDYV PPTANLDQKD KQFVAKVMQV LNADAIVVKL 360
NSGDYKTIHL SSIRPPRLEG DNIQDKNKKL RPLYDIPYMF EAREFLRKKL IGKKVNVTVD 420
YIRPASPATE TVPAFSERTC ATVTIGGINI AEALVSKGLA TVIRYRQDDD QRSSHYDELL 480
AAEARAIKNG KGLHSKKEVP IHRVADISGD TQKAKQFLPF LQRAGRSEAV VEYVFSGSRL 540
KLYLPKETCL ITFLLAGIEC PRGARNLPGL VQEGEPFSEE ATLFTKELVL QREVEVEVES 600
MDKAGNFIGW LHMDGANLSV LLVEQALSKV HFTAERSAYY KPLLSAEEAA KQRKEKVWAH 660
YEERPVEEVM PVLEEKERSA SYKPVFVTEI TDDLHFYVQD VETGTQLEKL MENMRNDISS 720
HPPVEGSYAP RRGEFCIAKF VDGEWYRARV EKVESPAKVH VFYIDYGNRE ILPSTRLGTL 780
PPAFSTRVLP AQATEYAFAF IQVPQDEDAR TDAVDSVVRD IQNTQCLLNV EHLSASCPHV 840
TLQFADSKGD VGLGLVKEGL VMVEVRKEKQ FQKVITEYLN AQESAKSARL NLWRYGDFRA 900
DDADEFGYSR 910 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0016442; C:RNA-induced silencing complex; IEA:InterPro.
 GO:0004518; F:nuclease activity; IEA:InterPro.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0031047; P:gene silencing by RNA; IEA:InterPro.
 GO:0090305; P:nucleic acid phosphodiester bond hydrolysis; IEA:GOC. 
Interpro
 IPR016685; Silence_cplx_Nase-comp_TudorSN.
 IPR016071; Staphylococal_nuclease_OB-fold.
 IPR006021; Staphylococcal_nuclease.
 IPR002071; Thermonucl_AS.
 IPR002999; Tudor. 
Pfam
 PF00565; SNase
 PF00567; TUDOR 
SMART
 SM00318; SNc
 SM00333; TUDOR 
PROSITE
 PS01284; TNASE_2
 PS50830; TNASE_3
 PS50304; TUDOR 
PRINTS