CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010685
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Survival motor neuron protein 
Protein Synonyms/Alias
  
Gene Name
 Smn1 
Gene Synonyms/Alias
 Smn 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
42ALIKAYDKAVASFKHacetylation[1]
Reference
 [1] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337
Functional Description
 The SMN complex plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus. It may also play a role in the metabolism of snoRNPs (By similarity). 
Sequence Annotation
 DOMAIN 88 148 Tudor.
 REGION 274 288 Required for interaction with SYNCRIP (By
 MOD_RES 5 5 Phosphoserine (By similarity).
 MOD_RES 22 22 Phosphothreonine (By similarity).
 MOD_RES 25 25 Phosphoserine.
 MOD_RES 28 28 Phosphoserine.  
Keyword
 Complete proteome; Cytoplasm; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; RNA-binding; Spliceosome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 288 AA 
Protein Sequence
MAMGSGGAGS EQEDTVLFRR GTGQSDDSDI WDDTALIKAY DKAVASFKHA LKNGDICETP 60
DKPKGTARRK PAKKNKSQKK NATTPLKQWK VGDKCSAVWS EDGCIYPATI TSIDFKRETC 120
VVVYTGYGNR EEQNLSDLLS PTCEVANSTE QNTQENESQV STDDSEHSSR SLRSKAHSKS 180
KAAPWTSFLP PPPPMPGSGL GPGKPGLKFN GPPPPPPLPP PPFLPCWMPP FPSGPPIIPP 240
PPPISPDCLD DTDALGSMLI SWYMSGYHTG YYMGFRQNKK EGKCSHTN 288 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:MGI.
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0007409; P:axonogenesis; IMP:MGI.
 GO:0007019; P:microtubule depolymerization; IMP:MGI.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. 
Interpro
 IPR010304; Survival_motor_neuron.
 IPR002999; Tudor. 
Pfam
 PF06003; SMN 
SMART
 SM00333; TUDOR 
PROSITE
 PS50304; TUDOR 
PRINTS