CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043807
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Uncharacterized protein 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
92GLPSTYNKDLQEDKEubiquitination[1]
211TDLKEQRKESGKNKHubiquitination[2]
257REFLTALKSHKLTKAubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 293 AA 
Protein Sequence
XTSERDFVAE FLFWASLCMT HLSRMAEDLI LYCTKEFSFV QLSDAYSTGS SLMPQKKNPD 60
SLELIRSKAG RVFGRCAGLL MTLKGLPSTY NKDLQEDKEA VFEVSDTMSA VLQVATGVIS 120
TLQIHQENMG QALSPDMLAT DLAYYLVRKG MPFRQAHEAS GKAVFMAETK GVALNQLSLQ 180
ELQTIRKDAN SALLSNYEVF QLLTDLKEQR KESGKNKHSS GQQNLNTITY ETLKYISKTP 240
CRHQSPEIVR EFLTALKSHK LTKAEKLQLL NHRPVTAVEI QLMVEESEER LTE 293 
Gene Ontology
 GO:0004056; F:argininosuccinate lyase activity; IEA:InterPro.
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0042450; P:arginine biosynthetic process via ornithine; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR009049; Argininosuccinate_lyase.
 IPR003031; D_crystallin.
 IPR000362; Fumarate_lyase.
 IPR020557; Fumarate_lyase_CS.
 IPR022761; Fumarate_lyase_N.
 IPR010997; HRDC-like.
 IPR008948; L-Aspartase-like.
 IPR005574; RNA_pol_II_Rpb4.
 IPR006590; RNA_pol_II_Rpb4_core. 
Pfam
 PF00206; Lyase_1
 PF03874; RNA_pol_Rpb4 
SMART
 SM00657; RPOL4c 
PROSITE
 PS00163; FUMARATE_LYASES 
PRINTS
 PR00145; ARGSUCLYASE.
 PR00149; FUMRATELYASE.