CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015904
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Autophagy-related protein 9A 
Protein Synonyms/Alias
 APG9-like 1; mATG9 
Gene Name
 ATG9A 
Gene Synonyms/Alias
 APG9L1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
164YMVALVNKSLLPLRFubiquitination[1]
520TAFLGFLKEQVQRDGubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Cycles between a juxta-nuclear trans-Golgi network compartment and late endosomes. Nutrient starvation induces accumulation on autophagosomes. Starvation-dependent trafficking requires ULK1, ATG13 and SUPT20H. 
Sequence Annotation
 MOD_RES 18 18 Phosphoserine.
 MOD_RES 656 656 Phosphoserine.
 MOD_RES 735 735 Phosphoserine.
 MOD_RES 738 738 Phosphoserine.
 MOD_RES 741 741 Phosphoserine.
 MOD_RES 828 828 Phosphoserine.
 CARBOHYD 99 99 N-linked (GlcNAc...).  
Keyword
 Alternative splicing; Autophagy; Complete proteome; Cytoplasmic vesicle; Endoplasmic reticulum; Endosome; Glycoprotein; Golgi apparatus; Membrane; Phosphoprotein; Polymorphism; Protein transport; Reference proteome; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 839 AA 
Protein Sequence
MLIGEIFELM QFLFVVAFTT FLVSCVDYDI LFANKMVNHS LHPTEPVKVT LPDAFLPAQV 60
CSARIQENGS LITILVIAGV FWIHRLIKFI YNICCYWEIH SFYLHALRIP MSALPYCTWQ 120
EVQARIVQTQ KEHQICIHKR ELTELDIYHR ILRFQNYMVA LVNKSLLPLR FRLPGLGEAV 180
FFTRGLKYNF ELILFWGPGS LFLNEWSLKA EYKRGGQRLE LAQRLSNRIL WIGIANFLLC 240
PLILIWQILY AFFSYAEVLK REPGALGARC WSLYGRCYLR HFNELEHELQ SRLNRGYKPA 300
SKYMNCFLSP LLTLLAKNGA FFAGSILAVL IALTIYDEDV LAVEHVLTTV TLLGVTVTVC 360
RSFIPDQHMV FCPEQLLRVI LAHIHYMPDH WQGNAHRSQT RDEFAQLFQY KAVFILEELL 420
SPIVTPLILI FCLRPRALEI IDFFRNFTVE VVGVGDTCSF AQMDVRQHGH PQWLSAGQTE 480
ASVYQQAEDG KTELSLMHFA ITNPGWQPPR ESTAFLGFLK EQVQRDGAAA SLAQGGLLPE 540
NALFTSIQSL QSESEPLSLI ANVVAGSSCR GPPLPRDLQG SRHRAEVASA LRSFSPLQPG 600
QAPTGRAHST MTGSGVDART ASSGSSVWEG QLQSLVLSEY ASTEMSLHAL YMHQLHKQQA 660
QAEPERHVWH RRESDESGES APDEGGEGAR APQSIPRSAS YPCAAPRPGA PETTALHGGF 720
QRRYGGITDP GTVPRVPSHF SRLPLGGWAE DGQSASRHPE PVPEEGSEDE LPPQVHKV 778 
Gene Ontology
 GO:0000421; C:autophagic vacuole membrane; IEA:UniProtKB-SubCell.
 GO:0031410; C:cytoplasmic vesicle; IEA:UniProtKB-KW.
 GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
 GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
 GO:0000045; P:autophagic vacuole assembly; IMP:MGI.
 GO:0045087; P:innate immune response; IEA:Compara.
 GO:0034067; P:protein localization to Golgi apparatus; IEA:Compara.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW. 
Interpro
 IPR007241; Autophagy-rel_prot_9. 
Pfam
 PF04109; APG9 
SMART
  
PROSITE
  
PRINTS