CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016288
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Leucine-rich repeat-containing protein 28 
Protein Synonyms/Alias
  
Gene Name
 LRRC28 
Gene Synonyms/Alias
 UNQ436/PRO867 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
7*MASELCKTISVARLubiquitination[1]
18VARLEKHKNLFLNYRubiquitination[1]
36HFPLELLKDEGLQYLubiquitination[1]
134PPEVGDLKELQTLDIubiquitination[2]
217VDNNIHLKGLPSYLYubiquitination[1]
226LPSYLYNKVIGCSGCubiquitination[1]
243PIQVSEVKLLSFSSGubiquitination[1]
261VFLPAEVKAIGTEHDubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
 REPEAT 16 36 LRR 1.
 REPEAT 42 63 LRR 2.
 REPEAT 66 87 LRR 3.
 REPEAT 89 110 LRR 4.
 REPEAT 112 133 LRR 5.
 REPEAT 135 156 LRR 6.
 REPEAT 158 180 LRR 7.
 REPEAT 181 202 LRR 8.
 REPEAT 204 226 LRR 9.  
Keyword
 Alternative splicing; Complete proteome; Leucine-rich repeat; Polymorphism; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 367 AA 
Protein Sequence
MASELCKTIS VARLEKHKNL FLNYRNLHHF PLELLKDEGL QYLERLYMKR NSLTSLPENL 60
AQKLPNLVEL YLHSNNIVVV PEAIGSLVKL QCLDLSDNAL EIVCPEIGRL RALRHLRLAN 120
NQLQFLPPEV GDLKELQTLD ISTNRLLTLP ERLHMCLSLQ YLTVDRNRLW YVPRHLCQLP 180
SLNELSMAGN RLAFLPLDLG RSRELQYVYV DNNIHLKGLP SYLYNKVIGC SGCGAPIQVS 240
EVKLLSFSSG QRTVFLPAEV KAIGTEHDHV LPLQELAMRG LYHTYHSLLK DLNFLSPISL 300
PRSLLELLHC PLGHCHRCSE PMFTIVYPKL FPLRETPMAG LHQWKTTVSF VAYCCSTQCL 360
QTFDLLS 367 
Gene Ontology
  
Interpro
 IPR003591; Leu-rich_rpt_typical-subtyp. 
Pfam
  
SMART
 SM00369; LRR_TYP 
PROSITE
  
PRINTS