CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035681
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 5'-3' exoribonuclease 2 (Predicted), isoform CRA_c 
Protein Synonyms/Alias
 Protein Xrn2 
Gene Name
 Xrn2 
Gene Synonyms/Alias
 Xrn2_predicted; rCG_27545 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
250FAIDLNGKKYAWQGVacetylation[1]
406SSNGRQWKPQLGFNRacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 561 AA 
Protein Sequence
MIMLAVGEVE DSIFKKRKDD EDSFRRRQKE KRKRMKRDQP AFTPSGILTP YALGSRNSPG 60
CQVASNPRQA AYEMRMQSNS SPSISPNTSF ASDGSPSPLG GLKRKAEDSD SEPEPEDNVR 120
LWEAGWKQRY YKNKFDVDAA DEKFRRKVVQ SYVEGLCWVL RYYYQGCASW KWYYPFHYAP 180
FASDFEGIAD MPSEFEKGTK PFKPLEQLMG VFPAASGNFL PPTWRKLMSD PDSSIIDFYP 240
EDFAIDLNGK KYAWQGVALL PFVDERRLRA ALEEVYPDLT PEENRRNSLG SDVLFVGKVH 300
PLHDFILELY QTGSTEPVDV PPELCHGIQG KFSLDEEAIL PDQTVCSPVP MLRDLTQNTA 360
ISINFKDPQF AEDYVFKAIM LPGARKPAAV LKPGDWEKSS NGRQWKPQLG FNRDRRPVHL 420
DQAAFRTLGH VIPRGSGTGV YSNTAPPPAN YQGNVYRPLL RGQAQIPKLM SNMRPQDNWR 480
GPPPLFQQQR FDRSVGAEPL LPWNRMLQTQ NAAFQPNQYQ MLAGPGGYPP RRDDHRGGRQ 540
GYPREGRKYP LPPPSGRYSW N 561 
Gene Ontology
 GO:0016235; C:aggresome; IEA:Compara.
 GO:0005730; C:nucleolus; IEA:Compara.
 GO:0008409; F:5'-3' exonuclease activity; IEA:Compara.
 GO:0016049; P:cell growth; IEA:Compara.
 GO:0000738; P:DNA catabolic process, exonucleolytic; IEA:Compara.
 GO:0016070; P:RNA metabolic process; IEA:Compara.
 GO:0007283; P:spermatogenesis; IEA:Compara. 
Interpro
 IPR027073; 5_3_exoribonuclease. 
Pfam
  
SMART
  
PROSITE
  
PRINTS