CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008737
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 M-phase phosphoprotein 6 homolog 
Protein Synonyms/Alias
 Exosome-associated RNA-binding protein MPP6 
Gene Name
 MPP6 
Gene Synonyms/Alias
 YNR024W; N3230 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
10ANNGVTGKLSSRVMNacetylation[1]
128DSGSRKRKFDEGEQNacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Involved in surveillance of pre-rRNAs and pre-mRNAs, and the degradation of cryptic non-coding RNAs (ncRNA) derived from intergenic regions and the ribosomal DNA spacer heterochromatin. Binds RNA. 
Sequence Annotation
 MOD_RES 42 42 Phosphoserine.
 MOD_RES 150 150 Phosphoserine.  
Keyword
 Complete proteome; Nucleus; Phosphoprotein; Reference proteome; RNA-binding; rRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 186 AA 
Protein Sequence
MSANNGVTGK LSSRVMNMKF MKFGKTDDEE SSNSNTPSNI NSDVEPIEQK GKLFGLDDSA 60
WDLNSYKDDL KKISGKEKKK VKRVVYKKRP NLIISNVGYS ELRKPEGVIS GRKTFGDNSD 120
DSGSRKRKFD EGEQNEDEKR DAKDKEFTGS QDDGEDEYDL DKLFKDSIKK KKTNHNGKNK 180
NRNSKK 186 
Gene Ontology
 GO:0005829; C:cytosol; IDA:SGD.
 GO:0000176; C:nuclear exosome (RNase complex); IDA:SGD.
 GO:0008266; F:poly(U) RNA binding; IDA:SGD.
 GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
 GO:0071031; P:nuclear mRNA surveillance of mRNA 3'-end processing; IGI:SGD.
 GO:0071030; P:nuclear mRNA surveillance of spliceosomal pre-mRNA splicing; IGI:SGD.
 GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IMP:SGD.
 GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IGI:SGD. 
Interpro
  
Pfam
  
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PRINTS