CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041586
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Cytoplasmic dynein 1 intermediate chain 1 
Protein Synonyms/Alias
  
Gene Name
 Dync1i1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
55LNKLGVSKVTQVDFLubiquitination[1]
189FYDEHWSKHRVVTCMacetylation[2]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 548 AA 
Protein Sequence
MSPSSKSVST PSEAGSQDDL GPLTRTLQWD TDPSVLQLQS DSELGRRLNK LGVSKVTQVD 60
FLPREVVSYS KETQTPLATH QSEEDEEDEE MVEPKVGHDS ELENQDKKQE TKEAPPRELT 120
EEEKQQILHS EEFLIFFDRT IRVIERALAE DSDIFFDYSG RELEEKDGDV QAGANLSFNR 180
QFYDEHWSKH RVVTCMDWSL QYPELMVASY SNNEDAPHEP DGVALVWNMK FKKTTPEYVF 240
HCQSSVMSVC FARFHPNLVV GGTYSGQIVL WDNRSHRRTP VQRTPLSAAA HTHPVYCVNV 300
VGTQNAHNLI TVSTDGKMCS WSLDMLSTPQ ESMELVYNKS KPVAVTGMAF PTGDVNNFVV 360
GSEEGTVYTA CRHGSKAGIG EVFEGHQGPV TGINCHMAVG PIDFSHLFVT SSFDWTVKLW 420
TTKHNKPLYS FEDNADYVYD VMWSPVHPAL FACVDGMGRL DLWNLNSDTE VPTASVAIEG 480
ASALNRVRWA QGGKEVAVGD SEGRIWIYDV GELAVPHNDE WTRFARTLVE IRANRADSEE 540
EGAVELAA 548 
Gene Ontology
 GO:0005868; C:cytoplasmic dynein complex; IEA:InterPro.
 GO:0000776; C:kinetochore; IEA:Compara.
 GO:0000922; C:spindle pole; IEA:Compara.
 GO:0031982; C:vesicle; IEA:Compara.
 GO:0007018; P:microtubule-based movement; IEA:InterPro. 
Interpro
 IPR025956; Dynein_IC_1/2.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF11540; Dynein_IC2
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS50294; WD_REPEATS_REGION 
PRINTS