CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-027695
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Pcdhgb6 
Protein Synonyms/Alias
 Protocadherin gamma C3; Protocadherin gamma subfamily C, 3 
Gene Name
 Pcdhgc3 
Gene Synonyms/Alias
 Pcdhgb6 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
912TLTNAAGKRDGKAPAubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain (By similarity). 
Sequence Annotation
  
Keyword
 Calcium; Cell adhesion; Cell membrane; Complete proteome; Membrane; Reference proteome; Repeat; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 934 AA 
Protein Sequence
MVAEARSSGL VSPWRTVGVL LLLAALTEAS TIIHYEILEE RERGFPVGNV VTDLGLDLGS 60
LSARRLRVVS GASRRFFEVN WETGEMFVND RLDREELCGT LPSCTVTLEL VVENPLELFS 120
AEVVVQDIND NNPSFPTGEM KLEISEALAP GTRFPLESAH DPDVGSNSLQ TYELSHNEYF 180
ALRVQTREDG TKYAELVLER ALDWEREPSV QLVLTALDGG TPARSATLPI RITVLDANDN 240
APAFNQSLYR ARVREDAPPG TRVAQVLATD LDEGLNGEIV YSFGSHNRAG VRELFALDLV 300
TGVLTIKGRL DFEDTKLHEI YIQAKDKGAN PEGAHCKVLV EVVDVNDNAP EITVTSVYSP 360
VPEDAPLGTV IALLSVTDLD AGENGLVTCE VPPGLPFSLT SSLKNYFTLK TSAALDRETM 420
PEYNLSITAR DSGIPSLSAL TTVKVQVSDI NDNPPQSSQS SYDVYVEENN LPGVPILNLS 480
VWDPDAPPNA RLSFFLLEPG AETGLVSRYF TINRDNGVLT TLVPLDYEDQ REFQLTAHIN 540
DGGTPVLATN ISVNVFVTDR NDNAPQVLYP RPGQSSVEML PRGTAAGHVV SRVVGWDADA 600
GHNAWLSYSL LGAPNQSLFA VGLHTGQIST ARPIQDTDSP RQILTVLISD SGEPLLSTTA 660
TLTVSVTEES PEARAEFPSG SAPREQNKNL TFYLLLSLIL VSVGFAVTVL GVIIFKVYKW 720
KRSRDLYRAP VSSLYRTPGP SLHADAVRGG LMPPHLYHQV YLTTDSRRSD PLLKKPGAAS 780
PLASRQNTLR SCDPVFYRQV LGAESAPPGQ QAPPNTDWRF SQAQRPGTSG SQNGDETGTW 840
PNNQFDTEML QAMILASASE AADGSSTLGG GAGTMGLSAR YGPQFTLQHV PDYRQNVYIP 900
GSNATLTNAA GKRDGKAPAG GNGNKKKSGK KEKK 934 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0007156; P:homophilic cell adhesion; IEA:InterPro. 
Interpro
 IPR002126; Cadherin.
 IPR015919; Cadherin-like.
 IPR020894; Cadherin_CS.
 IPR013164; Cadherin_N. 
Pfam
 PF00028; Cadherin
 PF08266; Cadherin_2 
SMART
 SM00112; CA 
PROSITE
 PS00232; CADHERIN_1
 PS50268; CADHERIN_2 
PRINTS
 PR00205; CADHERIN.