CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003594
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uncharacterized oxidoreductase YghA 
Protein Synonyms/Alias
  
Gene Name
 yghA 
Gene Synonyms/Alias
 b3003; JW2972 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
5***MSHLKDPTTQYYacetylation[1]
18YYTGEYPKQKQPTPGacetylation[1]
20TGEYPKQKQPTPGIQacetylation[1]
39PVPDCGEKTYVGSGRacetylation[1, 2]
92EEDAQDVKKIIEECGacetylation[1]
101IIEECGRKAVLLPGDacetylation[1]
113PGDLSDEKFARSLVHacetylation[1]
124SLVHEAHKALGGLDIacetylation[1, 3]
220LAKQVAEKGIRVNIVacetylation[1]
246SGGQTQDKIPQFGQQacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842]
 [3] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
  
Sequence Annotation
 NP_BIND 53 77 NAD or NADP (By similarity).
 ACT_SITE 199 199 Proton acceptor (By similarity).
 BINDING 186 186 Substrate (By similarity).
 MOD_RES 39 39 N6-acetyllysine.  
Keyword
 Acetylation; Complete proteome; Oxidoreductase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 294 AA 
Protein Sequence
MSHLKDPTTQ YYTGEYPKQK QPTPGIQAKM TPVPDCGEKT YVGSGRLKDR KALVTGGDSG 60
IGRAAAIAYA REGADVAISY LPVEEEDAQD VKKIIEECGR KAVLLPGDLS DEKFARSLVH 120
EAHKALGGLD IMALVAGKQV AIPDIADLTS EQFQKTFAIN VFALFWLTQE AIPLLPKGAS 180
IITTSSIQAY QPSPHLLDYA ATKAAILNYS RGLAKQVAEK GIRVNIVAPG PIWTALQISG 240
GQTQDKIPQF GQQTPMKRAG QPAELAPVYV YLASQESSYV TAEVHGVCGG EHLG 294 
Gene Ontology
 GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW. 
Interpro
 IPR002198; DH_sc/Rdtase_SDR.
 IPR002347; Glc/ribitol_DH.
 IPR016040; NAD(P)-bd_dom.
 IPR020904; Sc_DH/Rdtase_CS. 
Pfam
  
SMART
  
PROSITE
 PS00061; ADH_SHORT 
PRINTS
 PR00081; GDHRDH.
 PR00080; SDRFAMILY.