CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024228
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 30S ribosomal protein S17 
Protein Synonyms/Alias
  
Gene Name
 rpsQ 
Gene Synonyms/Alias
 MSMEG_1445; MSMEI_1409 
Created Date
 July 27, 2013 
Organism
 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) 
NCBI Taxa ID
 246196 
Lysine Modification
Position
Peptide
Type
References
96RLVEILEKAK*****pupylation[1]
Reference
 [1] Expansion of the mycobacterial "PUPylome".
 Watrous J, Burns K, Liu WT, Patel A, Hook V, Bafna V, Barry CE 3rd, Bark S, Dorrestein PC.
 Mol Biosyst. 2010 Feb;6(2):376-85. [PMID: 20094657
Functional Description
 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA (By similarity). 
Sequence Annotation
 CROSSLNK 96 96 Isoglutamyl lysine isopeptide (Lys-Gln)  
Keyword
 Complete proteome; Isopeptide bond; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 98 AA 
Protein Sequence
MADQKGPKYT PAAEKPRGRR KTAIGYVVSD KMQKTIVVEL EDRKSHPLYG KIIRTTKKVK 60
AHDENGEAGI GDRVSLMETR PLSATKRWRL VEILEKAK 98 
Gene Ontology
 GO:0005840; C:ribosome; IEA:UniProtKB-KW.
 GO:0019843; F:rRNA binding; IEA:HAMAP.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR000266; Ribosomal_S17.
 IPR019984; Ribosomal_S17_bac-type.
 IPR019979; Ribosomal_S17_CS. 
Pfam
 PF00366; Ribosomal_S17 
SMART
  
PROSITE
 PS00056; RIBOSOMAL_S17 
PRINTS
 PR00973; RIBOSOMALS17.