CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017876
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Nucleoporin NUP53 
Protein Synonyms/Alias
 35 kDa nucleoporin; Mitotic phosphoprotein 44; MP-44; Nuclear pore complex protein Nup53; Nucleoporin Nup35 
Gene Name
 Nup35 
Gene Synonyms/Alias
 Mp44; Nup53 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
293RPLATAYKASTSDYQubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. May play a role in the association of MAD1 with the NPC (By similarity). 
Sequence Annotation
 DOMAIN 169 249 RRM Nup35-type.
 MOD_RES 66 66 Phosphoserine (By similarity).
 MOD_RES 73 73 Phosphoserine (By similarity).
 MOD_RES 99 99 Phosphoserine (By similarity).
 MOD_RES 100 100 Phosphoserine (By similarity).
 MOD_RES 106 106 Phosphothreonine (By similarity).
 MOD_RES 121 121 Phosphoserine (By similarity).
 MOD_RES 128 128 Phosphothreonine (By similarity).
 MOD_RES 137 137 Phosphoserine (By similarity).
 MOD_RES 264 264 Phosphothreonine (By similarity).
 MOD_RES 272 272 Phosphothreonine (By similarity).
 MOD_RES 278 278 Phosphoserine (By similarity).
 MOD_RES 279 279 Phosphothreonine (By similarity).
 MOD_RES 307 307 Phosphothreonine (By similarity).  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Membrane; mRNA transport; Nuclear pore complex; Nucleus; Phosphoprotein; Protein transport; Reference proteome; Translocation; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 325 AA 
Protein Sequence
MAAFAVDPQA PTLGSEPMML GSPTSPKTGA NAQFLPGFLM GDLPAPVTPQ PRSISGPSVG 60
VMEMRSPLLA GGSPPQPVVP AHKDKSGAPP VRSIYDDISS PGLGSTPLTS RRQANISLLQ 120
SPLVGATTPV PGQSMFSPAN IGQPRKTTLS PAQLDPFYTQ GDSLTSEDHL DDTWVTVFGF 180
PQASASYILL QFAQYGNILK HVMSNTGNWM HIRYQSKLQA RKALSKDGRI FGESIMIGVK 240
PCIDKNVMEN SDRGVLSSPS LAFTTPIRTL GTPTQSGSTP RVSTMRPLAT AYKASTSDYQ 300
VISDRQTPKK DESLVSRAME YMFGW 325 
Gene Ontology
 GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
 GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
 GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0055085; P:transmembrane transport; IEA:InterPro. 
Interpro
 IPR017389; Nucleoporin_NUP53.
 IPR007846; RRM_NUP35_dom. 
Pfam
 PF05172; Nup35_RRM 
SMART
  
PROSITE
 PS51472; RRM_NUP35 
PRINTS