CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024065
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Integrin beta-6 
Protein Synonyms/Alias
  
Gene Name
 Itgb6 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
752EAERSKAKWQTGTNPubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Integrin alpha-V/beta-6 is a receptor for fibronectin and cytotactin. It recognizes the sequence R-G-D in its ligands (By similarity). 
Sequence Annotation
 DOMAIN 131 371 VWFA.
 REPEAT 456 501 I.
 REPEAT 502 543 II.
 REPEAT 544 582 III.
 REPEAT 583 619 IV.
 REGION 456 619 Cysteine-rich tandem repeats.
 REGION 730 757 Interaction with HAX1 (By similarity).
 CARBOHYD 48 48 N-linked (GlcNAc...) (Potential).
 CARBOHYD 97 97 N-linked (GlcNAc...) (Potential).
 CARBOHYD 260 260 N-linked (GlcNAc...) (Potential).
 CARBOHYD 387 387 N-linked (GlcNAc...) (Potential).
 CARBOHYD 418 418 N-linked (GlcNAc...) (Potential).
 CARBOHYD 463 463 N-linked (GlcNAc...) (Potential).
 CARBOHYD 471 471 N-linked (GlcNAc...) (Potential).
 CARBOHYD 541 541 N-linked (GlcNAc...) (Potential).
 CARBOHYD 575 575 N-linked (GlcNAc...) (Potential).
 DISULFID 23 454 By similarity.
 DISULFID 31 41 By similarity.
 DISULFID 34 70 By similarity.
 DISULFID 44 59 By similarity.
 DISULFID 197 204 By similarity.
 DISULFID 252 293 By similarity.
 DISULFID 394 406 By similarity.
 DISULFID 426 669 By similarity.
 DISULFID 452 456 By similarity.
 DISULFID 467 479 By similarity.
 DISULFID 476 511 By similarity.
 DISULFID 481 490 By similarity.
 DISULFID 492 502 By similarity.
 DISULFID 517 522 By similarity.
 DISULFID 519 552 By similarity.
 DISULFID 524 537 By similarity.
 DISULFID 539 544 By similarity.
 DISULFID 558 563 By similarity.
 DISULFID 560 591 By similarity.
 DISULFID 565 574 By similarity.
 DISULFID 576 583 By similarity.
 DISULFID 597 602 By similarity.
 DISULFID 599 645 By similarity.
 DISULFID 604 614 By similarity.
 DISULFID 617 620 By similarity.
 DISULFID 624 633 By similarity.
 DISULFID 630 701 By similarity.
 DISULFID 649 677 By similarity.  
Keyword
 Cell adhesion; Complete proteome; Disulfide bond; Glycoprotein; Integrin; Membrane; Receptor; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 787 AA 
Protein Sequence
MGIELVCLFL LLLGRNDHVQ GGCAWGGAES CSDCLLTGPH CAWCSQENFT HLSGAGERCD 60
TPANLLAKGC QLPFIENPVS RIEVLQNKPL SVGRQKNSSD IVQIAPQSLV LKLRPGREQT 120
LQVQVRQTED YPVDLYYLMD LSASMDDDLN TIKELGSRLA KEMSKLTSNF RLGFGSFVEK 180
PVSPFMKTTP EEITNPCSSI PYFCLPTFGF KHILPLTDDA ERFNEIVRKQ KISANIDTPE 240
GGFDAIMQAA VCKEKIGWRN DSLHLLVFVS DADSHFGMDS KLAGIVIPND GLCHLDHRNE 300
YSMSTVLEYP TIGQLIDKLV QNNVLLIFAV TQEQVHLYEN YAKLIPGATV GLLQKDSGNI 360
LQLIISAYEE LRSEVELEVL GDTEGLNLSF TALCNNGVLF PHQKKCSHMK VGDTASFNVT 420
VSVSNCEKRS RNLIIKPVGL GDTLEILVSA ECDCDCQREI ETNSSKCHNG NGSFQCGVCT 480
CNPGHMGPHC ECGEDMVSTD SCKESPGHPS CSGRGDCYCG QCICHLSPYG SIYGPYCQCD 540
NFSCLRHKGL LCGDNGDCDC GECVCRDGWT GEYCNCTTNR DSCTSEDGVL CSGRGDCVCG 600
KCVCRNPGAS GPTCERCPTC GDPCNSKRSC IECYLSADGQ AQEECADKCK AIGATISEED 660
FSKDTSVSCS LQGENECLIT FLITTDNEGK TIIHNINEKD CPKPPNIPMI MLGVSLAILL 720
IGVVLLCIWK LLVSFHDRKE VAKFEAERSK AKWQTGTNPL YRGSTSTFKN VTYKHREKHK 780
AGLSSDG 787 
Gene Ontology
 GO:0008305; C:integrin complex; IEA:InterPro.
 GO:0004872; F:receptor activity; IEA:InterPro.
 GO:0007160; P:cell-matrix adhesion; IEA:InterPro.
 GO:0006954; P:inflammatory response; IMP:MGI.
 GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.
 GO:0007275; P:multicellular organismal development; IEA:InterPro. 
Interpro
 IPR015812; Integrin_bsu.
 IPR015436; Integrin_bsu-6.
 IPR014836; Integrin_bsu_cyt_dom.
 IPR002369; Integrin_bsu_N.
 IPR012896; Integrin_bsu_tail.
 IPR003659; Plexin-like.
 IPR016201; Plexin-like_fold.
 IPR002035; VWF_A. 
Pfam
 PF08725; Integrin_b_cyt
 PF07965; Integrin_B_tail
 PF00362; Integrin_beta 
SMART
 SM00187; INB
 SM00423; PSI
 SM00327; VWA 
PROSITE
 PS00022; EGF_1
 PS01186; EGF_2
 PS00243; INTEGRIN_BETA
 PS50234; VWFA 
PRINTS
 PR01186; INTEGRINB.