| Tag | Content |
|---|
| CPLM ID | CPLM-014534 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | PHD and RING finger domain-containing protein 1 |
Protein Synonyms/Alias | CTD-binding SR-like protein rA9 |
Gene Name | Phrf1 |
Gene Synonyms/Alias | |
Created Date | July 27, 2013 |
Organism | Rattus norvegicus (Rat) |
NCBI Taxa ID | 10116 |
Lysine Modification | Position | Peptide | Type | References |
|---|
| 823 | PSPLFSIKKPKQLKS | acetylation | [1] |
|
Reference | [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns. Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV. Cell Rep. 2012 Aug 30;2(2):419-31. [ PMID: 22902405] |
Functional Description | |
Sequence Annotation | ZN_FING 109 150 RING-type; degenerate.
ZN_FING 188 238 PHD-type.
MOD_RES 335 335 Phosphothreonine (By similarity).
MOD_RES 460 460 Phosphoserine (By similarity).
MOD_RES 867 867 Phosphoserine (By similarity).
MOD_RES 870 870 Phosphoserine (By similarity).
MOD_RES 922 922 Phosphoserine (By similarity).
MOD_RES 948 948 Phosphoserine (By similarity).
MOD_RES 1002 1002 Phosphoserine (By similarity).
MOD_RES 1044 1044 Phosphoserine (By similarity).
MOD_RES 1046 1046 Phosphoserine (By similarity).
MOD_RES 1138 1138 Phosphoserine (By similarity).
MOD_RES 1139 1139 Phosphoserine (By similarity).
MOD_RES 1205 1205 Phosphoserine (By similarity).
MOD_RES 1372 1372 Phosphoserine (By similarity).
MOD_RES 1383 1383 Phosphoserine (By similarity).
MOD_RES 1416 1416 Phosphothreonine (By similarity). |
Keyword | Alternative splicing; Coiled coil; Complete proteome; Metal-binding; Phosphoprotein; Reference proteome; Zinc; Zinc-finger. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 1685 AA |
Protein Sequence | MDDDNLDELV AHSPGPDGPP QVGSSELASD AEESSNGHSE DSEDDTGSEQ DDDTDGEETE 60
GLSEEEDPED RSGSEDSEDG IEVPTAAVET QRKLEASSTP NSDDDAESCP ICLNAFRDQA 120
VGTPETCAHY FCLDCIIEWS RNANSCPVDR TIFKCICIRA QFNGKILKKI PVENTRACED 180
EEAEEEDPTF CEVCGRSDRE DRLLLCDGCD AGYHMECLDP PLQEVPVDEW FCPECAVPGV 240
DPTHDAAPVS DEEVSLLLAD VVPTTSRLRP RVGRTRAIAR TRQSERVRAT VNRNRISSAR 300
RVQHVPRYLM SSLLDETIEA VATGLSTAVY QRPLTPRVPA KRKRKAGRRK KVLGRKKTRS 360
RSSVKSKSGG TRAKKRQHRV RRTKGRKLKN EVTARSRIAR TLGLRRPVRG TSMPSVYKPV 420
DPSLGLMRAD IGAASLSLFG DPYALDPFDS NGEQSADPPS PLSAKRRVLS RSALQSHQPV 480
ARPVAMGLAR RQLPAVAPEP SVEEAPVPDL LGSILCGQSL LMMSSADVVI HRDGSLSAKR 540
AAPVSLQRNS VTQSREESRL RDNLQPGALP SESVSGGLIG DRRPNSGLSC GDRTALRCLP 600
AQIVQTPVRS DSSVTPRSGL SGNLSDESRP KWKHSNSPRL NGSNVRVGSA STKTMTHSNF 660
PSKNIAPGHP QKTDPRRPDF SKLPRIPKIR RDGSNSTQDQ APASGQTVEL PSACISRLTG 720
REGPGQPGRG RADSEPSSRG PQETGSHTSG SRPPAPSSHG NLAPLGPSRG KGIGSSFESF 780
RINIPGNTAH CSQLSSPGFC NTFRPVDSKV QRKENPSPLF SIKKPKQLKS EIYDPFDPTG 840
SDSSPPSSSP ESLGSGLLPS EITRTISINS PKAPAFQTVR CVTSYRVESV FGTEMDPDPQ 900
PPGEPVSGML ELLGKGPAEG ASDLEQEGLG EIEPTEIQGS SARAQRPSPP DPWDDEDGVS 960
CTPFFGSEER TVTCVTVEEP SVPSPDAPQI TTHRIVEFRA SSRSRSTSSS RSRKKTKKKK 1020
KVAREHQRTR SSTRSGSRDR TSRSVSPFTE EHTKRHRAKT KSRRSSSDRA SSQDRAKRRK 1080
DRDREHRRGP WGHGRCWRKS RSRSGSPGSS SCERHESRRR KRRHSGSRSR GRDGSPHSSL 1140
ERDRRHKHRE RSRERMDKKE SMTRSRERRR WRSRSPSVEH RTRRPHSREK HPHSPEKKGA 1200
VREVSPAPAP QGEPRQDGDH STKPPVSEVS VLPEVVSVLP EVVVADLNPP EVPPVLAESV 1260
SCVPEDLDYG DSVEAGHVFE DFSNEAIFIQ LDDMSSPPSP ESTDSSPERD FLPNPILPPA 1320
SLPQNSTLPV TQREVLPIHS EDISKPAPQP LAPSDQCLLR QDTVETTATT LSTPGVLPMG 1380
KDSPLLSGRG CEVVRPKDAV APAPLLRSRT LVKRVTWNLQ EAEASTPALD RDPRTPLQRP 1440
QRPQEGDWDA EDRALIGFQQ APFSELPPPI HVLQESGLPD ADPSQPPGVP RAEGPPAVGT 1500
LHSAGGILAQ VYSPNMPPPL AQPSSIPPYA LVNQPSVQLI LQGTLPLASC GAAQNLAPVP 1560
TMPATASELA VPTTNNSEER TATPKTAAEK TKKEEYMKKL HMQERAVEEV KLAIKPFYQK 1620
REVTKEEYKD ILRKAVQKIC HSKSGEINPV KVANLVKAYV DKYRHMRKHK KTEAGEEPPT 1680
QGAET 1685 |
Gene Ontology | GO:0019904; F:protein domain specific binding; IMP:RGD. GO:0008270; F:zinc ion binding; IEA:InterPro. GO:0006397; P:mRNA processing; IMP:RGD. GO:0006366; P:transcription from RNA polymerase II promoter; IMP:RGD. |
Interpro | |
Pfam | |
SMART | |
PROSITE | |
PRINTS | |