CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-025847
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribosomal protein L4 variant 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
120GRMFAPTKTWRRWHRubiquitination[1]
179VEGYKKTKEAVLLLKubiquitination[1]
233NEDNGIIKAFRNIPGubiquitination[1]
248ITLLNVSKLNILKLAubiquitination[1]
253VSKLNILKLAPGGHVubiquitination[1]
273WTESAFRKLDELYGTubiquitination[1]
288WRKAASLKSNYNLPMubiquitination[1]
297NYNLPMHKMINTDLSubiquitination[1]
308TDLSRILKSPEIQRAubiquitination[1]
341KNLRIMLKLNPYAKTubiquitination[1]
347LKLNPYAKTMRRNTIubiquitination[1]
367NHKLRVDKAAAAAAAubiquitination[1]
378AAAALQAKSDEKAAVubiquitination[1]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965] 
Functional Description
  
Sequence Annotation
  
Keyword
 Ribonucleoprotein; Ribosomal protein. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 441 AA 
Protein Sequence
AAGLRGAWLS PLSAMACARP LISVYSEKGE SSGKNVTLPA VFKAPIRPDI VNFVHTNLRK 60
NNRQPYAVSE LAGHQTSAES WGTGRAVARI PRVRGGGTHR SGQGAFGNMC RGGRMFAPTK 120
TWRRWHRRVN TTQKRYAICS ALAASALPAL VMSKGHRIEE VPELPLVVED KVEGYKKTKE 180
AVLLLKKLKA WNDIKKVYAS QRMRAGKGKM RNRRRIQRRG PCIIYNEDNG IIKAFRNIPG 240
ITLLNVSKLN ILKLAPGGHV GRFCIWTESA FRKLDELYGT WRKAASLKSN YNLPMHKMIN 300
TDLSRILKSP EIQRALRAPR KKIHRRVLKK NPLKNLRIML KLNPYAKTMR RNTILCQARN 360
HKLRVDKAAA AAAALQAKSD EKAAVAGKKP VVGKKGKKAA VGVKKQKKPL VGKKAAATKK 420
PAPEKKPAEK KPTTEEKKPA A 441 
Gene Ontology
 GO:0005840; C:ribosome; IEA:UniProtKB-KW.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:InterPro. 
Interpro
 IPR025755; Ribos_L4_C_dom.
 IPR002136; Ribosomal_L4/L1e.
 IPR013000; Ribosomal_L4/L1e_euk/arc_CS.
 IPR023574; Ribosomal_L4_dom. 
Pfam
 PF14374; Ribos_L4_asso_C
 PF00573; Ribosomal_L4 
SMART
  
PROSITE
 PS00939; RIBOSOMAL_L1E 
PRINTS