CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010706
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vascular endothelial growth factor D 
Protein Synonyms/Alias
 VEGF-D; c-Fos-induced growth factor; FIGF 
Gene Name
 Figf 
Gene Synonyms/Alias
 Vegfd 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
77WRCRLKLKSLASMDSubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Growth factor active in angiogenesis, lymphangiogenesis and endothelial cell growth, stimulating their proliferation and migration and also has effects on the permeability of blood vessels. May function in the formation of the venous and lymphatic vascular systems during embryogenesis, and also in the maintenance of differentiated lymphatic endothelium in adults. Binds and activates VEGFR-3 (Flt4) receptor. 
Sequence Annotation
 REPEAT 227 242 1; approximate.
 REPEAT 263 278 2.
 REPEAT 282 298 3.
 REPEAT 306 323 4.
 REGION 227 323 4 X 16 AA repeats of C-X(10)-C-X-C-
 CARBOHYD 160 160 N-linked (GlcNAc...) (Potential).
 CARBOHYD 190 190 N-linked (GlcNAc...) (Potential).
 CARBOHYD 292 292 N-linked (GlcNAc...) (Potential).
 DISULFID 116 158 By similarity.
 DISULFID 141 141 Interchain (By similarity).
 DISULFID 147 194 By similarity.
 DISULFID 150 150 Interchain (By similarity).
 DISULFID 151 196 By similarity.  
Keyword
 Angiogenesis; Cleavage on pair of basic residues; Complete proteome; Developmental protein; Differentiation; Disulfide bond; Glycoprotein; Growth factor; Mitogen; Reference proteome; Repeat; Secreted; Signal. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 358 AA 
Protein Sequence
MYGEWGMGNI LMMFHVYLVQ GFRSEHGPVK DFSFERSSRS MLERSEQQIR AASSLEELLQ 60
IAHSEDWKLW RCRLKLKSLA SMDSRSASHR STRFAATFYD TETLKVIDEE WQRTQCSPRE 120
TCVEVASELG KTTNTFFKPP CVNVFRCGGC CNEEGVMCMN TSTSYISKQL FEISVPLTSV 180
PELVPVKIAN HTGCKCLPTG PRHPYSIIRR SIQTPEEDEC PHSKKLCPID MLWDNTKCKC 240
VLQDETPLPG TEDHSYLQEP TLCGPHMTFD EDRCECVCKA PCPGDLIQHP ENCSCFECKE 300
SLESCCQKHK IFHPDTCSCE DRCPFHTRTC ASRKPACGKH WRFPKETRAQ GLYSQENP 358 
Gene Ontology
 GO:0005615; C:extracellular space; IDA:MGI.
 GO:0016020; C:membrane; IEA:InterPro.
 GO:0042056; F:chemoattractant activity; IEA:Compara.
 GO:0008083; F:growth factor activity; IDA:MGI.
 GO:0043185; F:vascular endothelial growth factor receptor 3 binding; IDA:MGI.
 GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.
 GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
 GO:0008283; P:cell proliferation; IDA:MGI.
 GO:0050930; P:induction of positive chemotaxis; IEA:Compara.
 GO:0051781; P:positive regulation of cell division; IEA:UniProtKB-KW.
 GO:0008284; P:positive regulation of cell proliferation; IDA:MGI.
 GO:0060754; P:positive regulation of mast cell chemotaxis; IEA:Compara.
 GO:0048010; P:vascular endothelial growth factor receptor signaling pathway; IGI:MGI. 
Interpro
 IPR000072; PD_growth_factor.
 IPR023581; PD_growth_factor_CS. 
Pfam
 PF00341; PDGF 
SMART
 SM00141; PDGF 
PROSITE
 PS00249; PDGF_1
 PS50278; PDGF_2 
PRINTS