CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002409
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Multifunctional CCA protein 
Protein Synonyms/Alias
 CCA-adding enzyme; CCA tRNA nucleotidyltransferase; tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl-transferase; tRNA nucleotidyltransferase; tRNA-NT; 2'-nucleotidase; 2',3'-cyclic phosphodiesterase; Phosphatase 
Gene Name
 cca 
Gene Synonyms/Alias
 b3056; JW3028 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
179LTPERVWKETESALTacetylation[1]
259TLCHDLGKGLTPPELacetylation[1]
279GHGPAGVKLVEQLCQacetylation[1]
321LNPKTIVKLFDSIDAacetylation[1]
404IAAVASWKEQRCPKPacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows highest phosphatase activity in the presence of Ni(2+) and hydrolyzes pyrophosphate, canonical 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi. Displays a metal-independent phosphodiesterase activity toward 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP. Without metal or in the presence of Mg(2+), this protein hydrolyzes 2',3'-cyclic substrates with the formation of 2'-nucleotides, whereas in the presence of Ni(2+), it also produces some 3'-nucleotides. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. 
Sequence Annotation
 METAL 21 21 Magnesium (By similarity).
 METAL 23 23 Magnesium (By similarity).
 BINDING 8 8 ATP or CTP; via amide nitrogen (By
 BINDING 11 11 ATP or CTP (By similarity).
 BINDING 91 91 ATP or CTP (By similarity).
 BINDING 137 137 ATP or CTP (By similarity).
 BINDING 140 140 ATP or CTP (By similarity).  
Keyword
 ATP-binding; Complete proteome; Hydrolase; Magnesium; Metal-binding; Multifunctional enzyme; Nickel; Nucleotide-binding; Nucleotidyltransferase; Reference proteome; RNA repair; RNA-binding; Transferase; tRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 412 AA 
Protein Sequence
MKIYLVGGAV RDALLGLPVK DRDWVVVGST PQEMLDAGYQ QVGRDFPVFL HPQTHEEYAL 60
ARTERKSGSG YTGFTCYAAP DVTLEDDLKR RDLTINALAQ DDNGEIIDPY NGLGDLQNRL 120
LRHVSPAFGE DPLRVLRVAR FAARYAHLGF RIADETLALM REMTHAGELE HLTPERVWKE 180
TESALTTRNP QVFFQVLRDC GALRVLFPEI DALFGVPAPA KWHPEIDTGI HTLMTLSMAA 240
MLSPQVDVRF ATLCHDLGKG LTPPELWPRH HGHGPAGVKL VEQLCQRLRV PNEIRDLARL 300
VAEFHDLIHT FPMLNPKTIV KLFDSIDAWR KPQRVEQLAL TSEADVRGRT GFESADYPQG 360
RWLREAWEVA QSVPTKAVVE AGFKGVEIRE ELTRRRIAAV ASWKEQRCPK PE 412 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:HAMAP.
 GO:0052929; F:ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity; IEA:EC.
 GO:0052928; F:CTP:3'-cytidine-tRNA cytidylyltransferase activity; IEA:EC.
 GO:0052927; F:CTP:tRNA cytidylyltransferase activity; IEA:EC.
 GO:0004112; F:cyclic-nucleotide phosphodiesterase activity; IEA:HAMAP.
 GO:0000287; F:magnesium ion binding; IEA:HAMAP.
 GO:0016791; F:phosphatase activity; IEA:HAMAP.
 GO:0004810; F:tRNA adenylyltransferase activity; IDA:EcoCyc.
 GO:0000049; F:tRNA binding; IEA:HAMAP.
 GO:0016437; F:tRNA cytidylyltransferase activity; IDA:EcoCyc.
 GO:0016311; P:dephosphorylation; IEA:GOC.
 GO:0042245; P:RNA repair; IMP:EcoCyc.
 GO:0001680; P:tRNA 3'-terminal CCA addition; IDA:EcoCyc. 
Interpro
 IPR012006; CCA_bact.
 IPR003607; HD/PDEase_dom.
 IPR006674; HD_domain.
 IPR002646; PolA_pol_head_dom. 
Pfam
 PF01966; HD
 PF01743; PolyA_pol 
SMART
 SM00471; HDc 
PROSITE
  
PRINTS