CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-038499
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Collagen alpha-6(VI) chain 
Protein Synonyms/Alias
  
Gene Name
 Col6a6 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
2222AAKLFQDKKRLSSMLacetylation[1]
Reference
 [1] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 2265 AA 
Protein Sequence
MLLVLCLTMI CFHVCVNQDS GPEYADVVFL VDSSDHLGLK SFPLVKTFIH KMISSLPIEA 60
NKYRVALAQY SDALHNEFQL GTFKNRNPML NHLKKNFGFI GGSLKIGNAL QEAHRTYFSA 120
PTNGRDKKQF PPILVVLASA ESEDDVEEAA KALREDGVKI ISVGVQKASE ENLKAMATSQ 180
FHFNLRTARD LSVFAPNMTE IIKDVTQYRE GMADDIIVEA CQGPSVADVV FLLDMAINGS 240
QEDLDHLKAF LGESISALDI KENCMRVGLV TYSNETRVIS SLSTGNNKTE VLQRIQDLSP 300
QVGQAYTGAA LRKTRKEIFS AQRGSRKNQG VPQIAVLVTH RASEDNVTKA AVNLRREGVT 360
IFTMGIEGAN PDELEKIASH PAEQFTSKLG NFSELATHNQ TFLKKLRNQI THTVSVFSER 420
TETLKSACVD TEEADIYLLI DGSGSTQPTD FHEMKTFLSE VVGMFNIAPH KVRVGAVQYA 480
DTWDLEFEIS KYSNKPDLGK AIENIRQMGG NTNTGAALNF TLKLLQRAKK ERGSKVPCHL 540
VVLTNGMSRD SVLGPAHKLR EENIRVHAIG VKEANQTQLR EIAGEEKRVY YVHEFDALRN 600
IRNQVVQEIC AEEACRDMKA DIMFLVDSSG SIGPENFSKM KMFMKNLVSK SQIGADRVQI 660
GVVQFSHENK EEFQLNTFMS QSDIANAIDR MTHIGETTLT GSALTFVSQY FSPDKGARPN 720
VRKFLILITD GEAQDIVRDP AIALRKEGVI IYSVGVFGSN VTQLEEISGK PEMVFYVENF 780
DILQHIEDDL VLGICSPREE CKRIEVLDVV FVIDSSGSID YQEYNIMKDF MIGLVKKADV 840
GKNQVRFGAL KYADDPEVLF YLDELGTKLE VVSVLQNDHP MGGNTYTAEA LAFSDHMFTE 900
ARGSRLHKGV PQVLIVITDG ESHDAEKLNT TAKALRDKGI LVLAVGIAGA NSWELLAMAG 960
SSDKYYFVET FGGLKGIFSD VSASVCNSSK VDCEIEKVDL VFLMDGSNSI HPDDFQKMKG 1020
FLVSVVQDFD VSLNRVRIGV AQFSDSYRSE FLLGTFTGER EISTQIEGIQ QIFGYTHIGD 1080
ALRKVKYYFQ PDMGSRINAG TPQVLLVLTD GRSQDEVAQA AEELRHKGVD IYSVGIGDVD 1140
DQELVQITGT AEKKLTVHNF DELKKVKKRI VRNICTSGGE SNCFVDVVVG FDISSLQRGQ 1200
TLLEGQPWMG SYLQDLLRAI SSLNGVSCEV GTETQVSIAF QVTNAMERYP SKFEIYSENI 1260
LSSLQGVTVN GPSRLNANLL SSLWDTFQNK SAARGKVVLL FSDGLDDGIE KLEQKSDELR 1320
KEGLNALITI AVDGAADSSD LADLLYIEFG KGFEYRTQFT IGMRNLGSQL SRQLINVAER 1380
TCCCLLCKCT GGDGAMGDPG SAGKKGPPGF KGSDGYLGEE GIAGERGASG PMGEQGTKGC 1440
FGAKGPKGTR GLSGEEGEVG EDGLDGLDGE QGDHGIPGRR GEKGDEGSQG NPGRRGAAGD 1500
RGAKGLRGDP GTPGRDSSIQ GPKGLKGDLG RQGRRGWPGS PGTPGSRRKM VVHGRRGHIG 1560
PQGNPGTPGP DGLAGSPGLR GPQGPRGEVG EKGEKGSLGM KGPQGPPGPG GQAGSQGHLG 1620
SQGNKGEPGD LGEKGAAGFP GPRGLQGDDG SPGYGSIGRK GTKGQEGFPG ESGLKGDIGD 1680
PGDPGEAGPK GARGKTVSAG IPGEPGSPGE PGPPGRKGVK GARGLASFST CDLIQYVRDH 1740
SRKKHGKPEC PVHPTELVFV LDQSRDVTEQ DFERMKGMMV SLVRDVKVRE ANCPVGARVA 1800
ILAYNSHTRH LIRFSDAYRK DQLLTAIKAL PYERSSDSRE IGKAMRFISR NVFKRTLPGA 1860
HVRRIATFFS SGPSADAQTI TTAAMEFSAL DIVPVVIAFS NVPSVKRAFS IDDTGTFQVI 1920
VVPSGSDEGP ALERLQRCTF CYDLCKPDAS CDQAKPPPIQ SYLDTAFLLD GSRHVGSAEF 1980
EDMRDFLEAL LDHFEITSEP ETSVTGDRVA LLSHAPLDFL PNTQRSPVRT EFNLTSYSSK 2040
RLMKRHVDQA VQQLHGDAFL GHALGWALDN VFLNTPNLRR NKVIFVISAG ETSHLDAETL 2100
KKESLRAKCH GYALFVFSLG PDWDDKELED LASHPVDQHL IQLGRIHKPD HGYSVKFVKS 2160
FINSIRHGIN KYPPVNLKAK CNRLGSRDLK PPPRQFRSFV PGPQKANLKD HTAEAAKLFQ 2220
DKKRLSSMLK GGRATISSLS RSTRYAFKQG KEAIKATSKL GKRSA 2265 
Gene Ontology
 GO:0031012; C:extracellular matrix; ISO:MGI. 
Interpro
 IPR008160; Collagen.
 IPR002035; VWF_A. 
Pfam
 PF01391; Collagen
 PF00092; VWA 
SMART
 SM00327; VWA 
PROSITE
 PS50234; VWFA 
PRINTS