CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000217
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Alpha-methylacyl-CoA racemase 
Protein Synonyms/Alias
 2-methylacyl-CoA racemase 
Gene Name
 Amacr 
Gene Synonyms/Alias
 Macr1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
57RSLALDLKRSQGVTVacetylation[1, 2, 3, 4, 5]
57RSLALDLKRSQGVTVsuccinylation[4]
86FRCGVMEKLQLGPETacetylation[1, 2, 3, 4, 5]
86FRCGVMEKLQLGPETsuccinylation[4]
100TLLQDNPKLIYARLSacetylation[2, 3, 4, 5]
100TLLQDNPKLIYARLSsuccinylation[4]
100TLLQDNPKLIYARLSubiquitination[6]
117GQSGIFSKVAGHDINacetylation[3, 4, 7]
117GQSGIFSKVAGHDINsuccinylation[4]
117GQSGIFSKVAGHDINubiquitination[6]
134ALSGVLSKIGRSGENubiquitination[6]
204TQPMGLWKQPRGQNIacetylation[3, 4]
204TQPMGLWKQPRGQNIsuccinylation[4]
204TQPMGLWKQPRGQNIubiquitination[6]
267SADWPEMKKKFADVFacetylation[4]
267SADWPEMKKKFADVFsuccinylation[4]
269DWPEMKKKFADVFAKacetylation[4]
269DWPEMKKKFADVFAKsuccinylation[4]
276KFADVFAKKTKAEWCacetylation[2, 5]
340TPAVPSAKRDPSVGEacetylation[3]
376DRIVESDKLKANL**acetylation[2, 4, 5]
376DRIVESDKLKANL**succinylation[4]
Reference
 [1] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [2] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [3] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [4] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [5] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [6] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [7] The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching.
 Yang L, Vaitheesvaran B, Hartil K, Robinson AJ, Hoopmann MR, Eng JK, Kurland IJ, Bruce JE.
 J Proteome Res. 2011 Sep 2;10(9):4134-49. [PMID: 21728379
Functional Description
 Racemization of 2-methyl-branched fatty acid CoA esters. Responsible for the conversion of pristanoyl-CoA and C27-bile acyl-CoAs to their (S)-stereoisomers. 
Sequence Annotation
 MOTIF 379 381 Microbody targeting signal (By
 ACT_SITE 151 151 Nucleophile (By similarity).  
Keyword
 Complete proteome; Direct protein sequencing; Isomerase; Mitochondrion; Peroxisome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 381 AA 
Protein Sequence
MVLRGVRVVE LAGLAPGPFC GMVLADFGAE VVRVNRLGST GENFLARGKR SLALDLKRSQ 60
GVTVLRRMCA RADVLLEPFR CGVMEKLQLG PETLLQDNPK LIYARLSGFG QSGIFSKVAG 120
HDINYLALSG VLSKIGRSGE NPYPPLNLLA DFGGGGLMCT LGIVLALFER TRSGRGQVID 180
SSMVEGTAYL SSFLWKTQPM GLWKQPRGQN ILDGGAPFYT TYKTADGEFM AVGAIEPQFY 240
ALLLKGLGLE SEELPSQMSS ADWPEMKKKF ADVFAKKTKA EWCQIFDGTD ACVTPVLTFE 300
EALHHQHNRE RASFITDGEQ LPSPRPAPLL SRTPAVPSAK RDPSVGEHTV EVLREYGFSQ 360
EEILQLHSDR IVESDKLKAN L 381 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0005777; C:peroxisome; IEA:UniProtKB-SubCell.
 GO:0008111; F:alpha-methylacyl-CoA racemase activity; TAS:MGI.
 GO:0006699; P:bile acid biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0006631; P:fatty acid metabolic process; IEA:UniProtKB-UniPathway.
 GO:0008300; P:isoprenoid catabolic process; TAS:MGI. 
Interpro
 IPR003673; CoA-Trfase_fam_III.
 IPR023606; CoA-Trfase_III_dom. 
Pfam
 PF02515; CoA_transf_3 
SMART
  
PROSITE
  
PRINTS