CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037573
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Atherin 
Protein Synonyms/Alias
  
Gene Name
 SAMD1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
75RTRAELEKLIQQRAVubiquitination[1, 2]
88AVLRVSYKGSISYRNubiquitination[1]
272QSAKERVKEWTPCGPubiquitination[1]
408IRLGPALKIYEHHIKubiquitination[1]
415KIYEHHIKVLQQGHFubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 432 AA 
Protein Sequence
MAGPPALPPP ETAAAATTAA AASSSAASPH YQEWILDTID SLRSRKARPD LERICRMVRR 60
RHGPEPERTR AELEKLIQQR AVLRVSYKGS ISYRNAARVQ PPRRGATPPA PPAPPQQQQP 120
PPPQPQPPPE GGAVRAGGAA RPVSLREVVR YLGGSGGAGG RLTRGRVQGL LEEEAAARGR 180
LERTRLGALA LPRGDRPGRA PPAASARPSR SKRGGEERVL EKEEEEDDDE DEDEEDDVSE 240
GSEVPESDRP AGAQHHQLNG ERGPQSAKER VKEWTPCGPH QGQDEGRGPA PGSGTRQVFS 300
MAAMNKEGGT ASVATGPDSP SPVPLPPGKP ALPGADGTPF GCPPGRKEKP SDPVEWTVMD 360
VVEYFTEAGF PEQATAFQEQ EIDGKSLLLM QRTDVLTGLS IRLGPALKIY EHHIKVLQQG 420
HFEDDDPDGF LG 432 
Gene Ontology
  
Interpro
 IPR001660; SAM.
 IPR013761; SAM/pointed.
 IPR021129; SAM_type1. 
Pfam
 PF00536; SAM_1 
SMART
 SM00454; SAM 
PROSITE
 PS50105; SAM_DOMAIN 
PRINTS