CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006084
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Deoxycytidylate deaminase 
Protein Synonyms/Alias
 dCMP deaminase 
Gene Name
 DCTD 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
42FLSAQRSKDPNSQVGubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Supplies the nucleotide substrate for thymidylate synthetase. 
Sequence Annotation
 ACT_SITE 86 86 Proton donor (By similarity).
 METAL 84 84 Zinc; catalytic (By similarity).
 METAL 110 110 Zinc; catalytic (By similarity).
 METAL 113 113 Zinc; catalytic (By similarity).  
Keyword
 3D-structure; Allosteric enzyme; Alternative splicing; Complete proteome; Direct protein sequencing; Hydrolase; Metal-binding; Nucleotide biosynthesis; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 178 AA 
Protein Sequence
MVGGGQPCGP NMSEVSCKKR DDYLEWPEYF MAVAFLSAQR SKDPNSQVGA CIVNSENKIV 60
GIGYNGMPNG CSDDVLPWRR TAENKLDTKY PYVCHAELNA IMNKNSTDVK GCSMYVALFP 120
CNECAKLIIQ AGIKEVIFMS DKYHDSDEAT AARLLFNMAG VTFRKFIPKC SKIVIDFDSI 180
NSRPSQKLQ 189 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0004132; F:dCMP deaminase activity; EXP:Reactome.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0009165; P:nucleotide biosynthetic process; IEA:UniProtKB-KW.
 GO:0006206; P:pyrimidine nucleobase metabolic process; TAS:Reactome.
 GO:0046134; P:pyrimidine nucleoside biosynthetic process; TAS:Reactome.
 GO:0006220; P:pyrimidine nucleotide metabolic process; TAS:ProtInc. 
Interpro
 IPR016192; APOBEC/CMP_deaminase_Zn-bd.
 IPR002125; CMP_dCMP_Zn-bd.
 IPR015517; Cyt_deaminase.
 IPR016193; Cytidine_deaminase-like.
 IPR016473; dCMP_deaminase. 
Pfam
 PF00383; dCMP_cyt_deam_1 
SMART
  
PROSITE
 PS00903; CYT_DCMP_DEAMINASES 
PRINTS