CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004014
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Creatine kinase B-type 
Protein Synonyms/Alias
 B-CK; Creatine kinase B chain 
Gene Name
 CKB 
Gene Synonyms/Alias
 CKBB 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
11SNSHNALKLRFPAEDubiquitination[1, 2]
156GERRAIEKLAVEALSubiquitination[3, 4]
196DDHFLFDKPVSPLLLubiquitination[4]
223GIWHNDNKTFLVWVNubiquitination[1, 2]
242LRVISMQKGGNMKEVubiquitination[1, 2, 4, 5, 6]
247MQKGGNMKEVFTRFCubiquitination[4, 7, 8]
265TQIETLFKSKDYEFMubiquitination[1, 2, 7]
298LRAGVHIKLPNLGKHubiquitination[1, 2]
304IKLPNLGKHEKFSEVubiquitination[1, 2, 5]
307PNLGKHEKFSEVLKRubiquitination[1, 2]
313EKFSEVLKRLRLQKRubiquitination[1, 2, 6]
381DDLMPAQK*******ubiquitination[6, 8]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Proteome-wide identification of ubiquitylation sites by conjugation of engineered lysine-less ubiquitin.
 Oshikawa K, Matsumoto M, Oyamada K, Nakayama KI.
 J Proteome Res. 2012 Feb 3;11(2):796-807. [PMID: 22053931]
 [4] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [5] Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level.
 Danielsen JM, Sylvestersen KB, Bekker-Jensen S, Szklarczyk D, Poulsen JW, Horn H, Jensen LJ, Mailand N, Nielsen ML.
 Mol Cell Proteomics. 2011 Mar;10(3):M110.003590. [PMID: 21139048]
 [6] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [7] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [8] Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels.
 Lee KA, Hammerle LP, Andrews PS, Stokes MP, Mustelin T, Silva JC, Black RA, Doedens JR.
 J Biol Chem. 2011 Dec 2;286(48):41530-8. [PMID: 21987572
Functional Description
 Reversibly catalyzes the transfer of phosphate between ATP and various phosphogens (e.g. creatine phosphate). Creatine kinase isoenzymes play a central role in energy transduction in tissues with large, fluctuating energy demands, such as skeletal muscle, heart, brain and spermatozoa. 
Sequence Annotation
 DOMAIN 11 98 Phosphagen kinase N-terminal.
 DOMAIN 125 367 Phosphagen kinase C-terminal.
 NP_BIND 128 132 ATP.
 NP_BIND 320 325 ATP.
 BINDING 72 72 Substrate; via amide nitrogen.
 BINDING 130 130 ATP.
 BINDING 132 132 ATP.
 BINDING 191 191 ATP.
 BINDING 232 232 Substrate.
 BINDING 236 236 ATP.
 BINDING 285 285 Substrate.
 BINDING 292 292 ATP.
 BINDING 320 320 ATP.
 BINDING 335 335 ATP (By similarity).
 MOD_RES 4 4 Phosphoserine.
 MOD_RES 35 35 Phosphothreonine.
 MOD_RES 39 39 Phosphotyrosine (By similarity).
 MOD_RES 125 125 Phosphotyrosine (By similarity).
 MOD_RES 164 164 Phosphoserine (By similarity).
 MOD_RES 199 199 Phosphoserine.
 MOD_RES 269 269 Nitrated tyrosine (By similarity).  
Keyword
 3D-structure; ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Kinase; Nitration; Nucleotide-binding; Phosphoprotein; Polymorphism; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 381 AA 
Protein Sequence
MPFSNSHNAL KLRFPAEDEF PDLSAHNNHM AKVLTPELYA ELRAKSTPSG FTLDDVIQTG 60
VDNPGHPYIM TVGCVAGDEE SYEVFKDLFD PIIEDRHGGY KPSDEHKTDL NPDNLQGGDD 120
LDPNYVLSSR VRTGRSIRGF CLPPHCSRGE RRAIEKLAVE ALSSLDGDLA GRYYALKSMT 180
EAEQQQLIDD HFLFDKPVSP LLLASGMARD WPDARGIWHN DNKTFLVWVN EEDHLRVISM 240
QKGGNMKEVF TRFCTGLTQI ETLFKSKDYE FMWNPHLGYI LTCPSNLGTG LRAGVHIKLP 300
NLGKHEKFSE VLKRLRLQKR GTGGVDTAAV GGVFDVSNAD RLGFSEVELV QMVVDGVKLL 360
IEMEQRLEQG QAIDDLMPAQ K 381 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0004111; F:creatine kinase activity; TAS:ProtInc.
 GO:0007420; P:brain development; IEA:Compara.
 GO:0030644; P:cellular chloride ion homeostasis; IEA:Compara.
 GO:0034641; P:cellular nitrogen compound metabolic process; TAS:Reactome.
 GO:0006600; P:creatine metabolic process; TAS:Reactome. 
Interpro
 IPR000749; ATP-guanido_PTrfase.
 IPR022415; ATP-guanido_PTrfase_AS.
 IPR022414; ATP-guanido_PTrfase_cat.
 IPR022413; ATP-guanido_PTrfase_N.
 IPR014746; Gln_synth/guanido_kin_cat_dom. 
Pfam
 PF00217; ATP-gua_Ptrans
 PF02807; ATP-gua_PtransN 
SMART
  
PROSITE
 PS00112; PHOSPHAGEN_KINASE
 PS51510; PHOSPHAGEN_KINASE_C
 PS51509; PHOSPHAGEN_KINASE_N 
PRINTS