CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001167
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vesicle-associated membrane protein 4 
Protein Synonyms/Alias
 VAMP-4 
Gene Name
 VAMP4 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
4****MPPKFKRHLNDubiquitination[1]
19DDVTGSVKSERRNLLubiquitination[1]
86RLDELQDKSESLSDNubiquitination[1]
114QMWWRGCKIKAIMALubiquitination[1]
116WWRGCKIKAIMALVAubiquitination[1]
137IIILIVMKYRT****ubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Involved in the pathway that functions to remove an inhibitor (probably synaptotagmin-4) of calcium-triggered exocytosis during the maturation of secretory granules. May be a marker for this sorting pathway that is critical for remodeling the secretory response of granule. 
Sequence Annotation
 DOMAIN 52 112 v-SNARE coiled-coil homology.
 MOD_RES 17 17 Phosphoserine (By similarity).
 MOD_RES 30 30 Phosphoserine.  
Keyword
 Alternative splicing; Coiled coil; Complete proteome; Golgi apparatus; Membrane; Phosphoprotein; Reference proteome; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 141 AA 
Protein Sequence
MPPKFKRHLN DDDVTGSVKS ERRNLLEDDS DEEEDFFLGP SGPRFGPRND KIKHVQNQVD 60
EVIDVMQENI TKVIERGERL DELQDKSESL SDNATAFSNR SKQLRRQMWW RGCKIKAIMA 120
LVAAILLLVI IILIVMKYRT 140 
Gene Ontology
 GO:0005768; C:endosome; TAS:ProtInc.
 GO:0000139; C:Golgi membrane; TAS:ProtInc.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005764; C:lysosome; TAS:ProtInc.
 GO:0031201; C:SNARE complex; IEA:Compara.
 GO:0005802; C:trans-Golgi network; IEA:Compara.
 GO:0043001; P:Golgi to plasma membrane protein transport; IEA:Compara.
 GO:0042996; P:regulation of Golgi to plasma membrane protein transport; IEA:Compara. 
Interpro
 IPR001388; Synaptobrevin.
 IPR016444; Synaptobrevin_met/fun. 
Pfam
 PF00957; Synaptobrevin 
SMART
  
PROSITE
 PS00417; SYNAPTOBREVIN
 PS50892; V_SNARE 
PRINTS
 PR00219; SYNAPTOBREVN.