CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-020007
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 UBX domain-containing protein 6 
Protein Synonyms/Alias
 UBX domain-containing protein 1 
Gene Name
 Ubxn6 
Gene Synonyms/Alias
 Ubxd1; Ubxdc2 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
160PVAASIMKIHTFNRDubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Acts in a complex with VCP and cooperates with USP7 in promoting MDM2 deubiquitination and stabilization. MDM2 stabilization leads to MDM2-dependent TP53 degradation (By similarity). 
Sequence Annotation
 DOMAIN 175 244 PUB.
 DOMAIN 332 408 UBX.
 MOD_RES 36 36 Phosphoserine.  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; Cytoskeleton; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 442 AA 
Protein Sequence
MKKFFQEIKA DIKFKSAGPG QKLTDSAGEK TTKGKSPQLA LRQPRQGPTD EAQMAAAAAL 60
ARLEQKQPRA RGPTSQDSIR NQVRKELQAE ATSSNNPGAP GTNSVPEPKE EISPHLAVPG 120
VFFICPLTGV TLRRDQRDAH IKQAILSHFS TDPVAASIMK IHTFNRDRDR VKLGVDTIAK 180
YLDNIHLHPE EEKYQKIKLQ NKVFQERINC LEGSHEFFEA IGFKKVTLPV PDQEGQEEFY 240
VLGEDARAQP QNLARHKQQL LDAEPVRATL DRQLRVFRPS ALASHFELPS DFFSLTAEEV 300
KREQRLRTEA VERLSSLRTK AMREKEEQRE LRKYTYALVR VRLPDGCLLQ GTFYAREKLS 360
ALFRFVREAL QNDWLPFELR ASGGQKLEEN EALALNECGL VPSALLTFSW DASVLEDIRA 420
AGAEPAKSVL RPELLAAIEQ LS 442 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
 GO:0005730; C:nucleolus; IEA:Compara. 
Interpro
 IPR018997; PUB_domain.
 IPR001012; UBX. 
Pfam
 PF09409; PUB
 PF00789; UBX 
SMART
 SM00166; UBX 
PROSITE
 PS50033; UBX 
PRINTS