UniProt Accession

 B0BN51_RAT; B0BN51 

Genbank Protein ID

 AABR06026161; BC158686; CH473949 

Genbank Nucleotide ID

 AAI58687.1; EDL80174.1 

Protein Name

 Small nuclear ribonucleoprotein-associated protein 

Protein Synonyms/Alias

  

Gene Name

 Snrpb 

Gene Synonyms/Alias

 rCG_26118 

Created Date

 July 27, 2013 

Organism

 Rattus norvegicus (Rat) 

NCBI Taxa ID

 10116 

Lysine Modification

Position	Peptide	Type	References
8	MTVGKSSKMLQHIDY	acetylation	[1]
32	RIFIGTFKAFDKHMN	acetylation	[1]

Reference

 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 

Functional Description

  

Sequence Annotation

  

Keyword

 Complete proteome; Nucleus; Reference proteome; Ribonucleoprotein; RNA-binding. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 231 AA 

Protein Sequence

Gene Ontology

 GO:0071013; C:catalytic step 2 spliceosome; IEA:Compara.
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0071204; C:histone pre-mRNA 3'end processing complex; IEA:Compara.
 GO:0005689; C:U12-type spliceosomal complex; IEA:Compara.
 GO:0005683; C:U7 snRNP; IEA:Compara.
 GO:0071208; F:histone pre-mRNA DCP binding; IEA:Compara. 

Interpro

 IPR010920; LSM_dom.
 IPR001163; Ribonucl_LSM.
 IPR006649; Ribonucl_LSM_euk/arc.
 IPR017131; snRNP-assoc_SmB/SmN. 

Pfam

 PF01423; LSM 

SMART

 SM00651; Sm 

PROSITE

  

PRINTS